Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 632 a.a., Heme/copper-type cytochrome/quinol oxidases, subunit 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  407 bits (1046), Expect = e-118
 Identities = 219/545 (40%), Positives = 310/545 (56%), Gaps = 40/545 (7%)

Query: 8   HAHGHDHAHGPAKGLMRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQI 67
           H H  DH       + +++ +T+HK IG  +L    +  L+GG  +++ R +L  P + +
Sbjct: 14  HDHHDDHHEHSDNFITKYIFSTDHKMIGKQFLVTGIVWALIGGFLSILFRLQLGFPDMDM 73

Query: 68  ----------------VEPAFFNQMTTMHGLIMVFGAVMPAFVG-LANWMIPLMIGAPDM 110
                           ++  F+  + TMHG IMVF  +     G  +N++IPL IGA DM
Sbjct: 74  TFLKPILGGWIDESGSLDTNFYLALVTMHGTIMVFFVLTAGLSGTFSNYLIPLQIGARDM 133

Query: 111 ALPRMNNFSFWLLPAAFLLLVSTLFSPGGGPNFGWTFYAPLSTTYA--PAS---VTFFIF 165
           A   MN  S+WL   A +++  +LF   G    GW  Y PLS      P S   +T ++ 
Sbjct: 134 ASGFMNMLSYWLFFIAGVIMFISLFIETGPAGGGWVIYPPLSALEQAIPGSGLGMTLWLV 193

Query: 166 AIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTM 225
           ++     S +MG IN I T++NLR  GM+  ++PL +W++ +TA + +   PVL     +
Sbjct: 194 SMVFFIASQLMGGINYITTVINLRTRGMSFSRLPLTIWSFFLTAVIGLLSFPVLFSAALL 253

Query: 226 MLMDIHFGTSFFSAA----------GGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSII 275
           ++ D  FGTSF+ +            GG  VLFQH+FWF GHPEVYI++LPA G  S +I
Sbjct: 254 LVFDRSFGTSFYLSDIYIGGEALPNTGGSAVLFQHLFWFLGHPEVYIVLLPALGITSEVI 313

Query: 276 PAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGI-PVVGELFFMYATMLIAVPTGV 334
              SRKP+FGY +M+ +   I  LSF+VWAHHMFV G+ P +G +F M+ T++IAVP+ V
Sbjct: 314 ATNSRKPIFGYKAMILSMLGITVLSFVVWAHHMFVSGMNPFLGSIF-MFLTLIIAVPSAV 372

Query: 335 KVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFH 394
           KVFN+++T+W G+L F   MLF+I  V  F  GG +G+ L  +  D Q HDTYFVVAHFH
Sbjct: 373 KVFNYLTTLWRGNLVFTPAMLFSIGLVSFFISGGLTGIFLGNSAVDIQLHDTYFVVAHFH 432

Query: 395 YVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPR 454
            V+   + FG+ A  Y+W PK  G M D  LG +HFWL+FVG+ M FFPMH++G+AG PR
Sbjct: 433 LVMGSASFFGLMAGVYHWFPKMFGKMMDAKLGYIHFWLTFVGVYMVFFPMHYIGIAGFPR 492

Query: 455 RIPDY-NLQFA----DFNMVSSIGAFMFGATQIFFLFIVIKCIRGGAPAPAKPWDGAEGL 509
           R   + N  FA    D NM  S+ A +    Q  FLF     +  G  AP  PW  +  L
Sbjct: 493 RYYSWTNFNFADMYTDLNMFVSVAAIVTFGAQFIFLFNFFNSMFRGRKAPLNPW-RSNTL 551

Query: 510 EWSIP 514
           EW+ P
Sbjct: 552 EWTTP 556