Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 663 a.a., cytochrome o ubiquinol oxidase subunit I from Escherichia coli BL21

 Score =  400 bits (1027), Expect = e-115
 Identities = 205/513 (39%), Positives = 305/513 (59%), Gaps = 11/513 (2%)

Query: 25  WVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAE--LFQPG-LQIVEPAFFNQMTTMHG 81
           W+ + +HK +G MY+  + +M L G + A+++R++  L   G    + P  ++Q+ T HG
Sbjct: 48  WLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHG 107

Query: 82  LIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGP 141
           +IM+F   MP  +GL N ++PL IGA D+A P +NN SFW      ++LV+     G   
Sbjct: 108 VIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVG-VILVNVSLGVGEFA 166

Query: 142 NFGWTFYAPLS-TTYAPA-SVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMP 199
             GW  Y PLS   Y+P   V ++I+++ L GI + +  IN   TIL +RAPGMT+ KMP
Sbjct: 167 QTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMP 226

Query: 200 LFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPE 259
           +F W  L    L+IA  P+L   V ++ +D + GT FF+   GG+ +++ ++ W +GHPE
Sbjct: 227 VFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPE 286

Query: 260 VYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGEL 319
           VYI+ILP FG  S I   FSRK LFGYTS+V+AT  I  LSFIVW HH F +G       
Sbjct: 287 VYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNA 346

Query: 320 FFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPA 379
           FF   TM+IA+PTGVK+FNW+ TM++G + F + ML+ I F++ F++GG +G++LA+  A
Sbjct: 347 FFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGA 406

Query: 380 DFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNM 439
           DF  H++ F++AHFH V++ G +FG FA   YW PK  G   +ET GK  FW   +G  +
Sbjct: 407 DFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFV 466

Query: 440 AFFPMHFVGLAGMPRRI-PDYNLQFADFNMVSSIGAFMFG---ATQIFFLFIVIKCIRGG 495
           AF P++ +G  GM RR+    + QF    M+++ GA +        +  +++ I+     
Sbjct: 467 AFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQN 526

Query: 496 APAPAKPWDGAEGLEWSIPSPAPYHTFQTPPEV 528
                 PW G   LEW+  SP P++ F   P V
Sbjct: 527 RDLTGDPW-GGRTLEWATSSPPPFYNFAVVPHV 558