Pairwise Alignments

Query, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

Subject, 667 a.a., cytochrome O ubiquinol oxidase subunit I from Agrobacterium fabrum C58

 Score =  412 bits (1059), Expect = e-119
 Identities = 203/515 (39%), Positives = 316/515 (61%), Gaps = 15/515 (2%)

Query: 25  WVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAE--LFQPGLQ-IVEPAFFNQMTTMHG 81
           W  + +HK IG MY+  + +M L G + A+++R +  +   G +  + P  ++Q+ T HG
Sbjct: 58  WFTSIDHKKIGIMYIILALVMLLRGFADAIMMRVQQAIASGGSEGYLPPHHYDQIFTAHG 117

Query: 82  LIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGP 141
           +IM+F   MP   GL N+++PL IGA D++ P +NNFSFW+  A  ++ + +LF  G   
Sbjct: 118 VIMIFFMAMPMITGLMNFVVPLQIGARDVSFPFLNNFSFWMTTAGAIITMISLFV-GEYA 176

Query: 142 NFGWTFYAPLSTTYAP--ASVTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMP 199
             GW  Y PLS         V ++I+ + + G+ + +  IN+I TI+ +RAPGMT+M+MP
Sbjct: 177 QTGWLAYPPLSGIDGSPGVGVDYYIWGLQIAGVGTTLSGINLIVTIIKMRAPGMTMMRMP 236

Query: 200 LFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPE 259
           +FVWT L +  L++A  P+L   + ++ +D + GT+FF+   GG+P+++ ++ W +GHPE
Sbjct: 237 IFVWTSLCSNILIVASFPILTATLALLTLDRYAGTNFFTNDLGGNPMMYVNLIWIWGHPE 296

Query: 260 VYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGEL 319
           VYI++LPAFG  S I+  FS K LFGY SMVYAT  I  LS++VW HH F +G       
Sbjct: 297 VYILVLPAFGIFSEIVATFSGKRLFGYASMVYATAVITILSYLVWLHHFFTMGSGANVNA 356

Query: 320 FFMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPA 379
           FF   TM+I++PTG K+FNW+ TM++G + F+ PML+ I F+I F IGG +G++LA+ PA
Sbjct: 357 FFGITTMIISIPTGAKIFNWLFTMYKGRIKFDVPMLWTIGFMITFVIGGMTGVLLAVPPA 416

Query: 380 DFQYHDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNM 439
           DF  H++ F++AHFH  ++ G +FG+ A   YW PK  G+  D   GKL FW  F+G   
Sbjct: 417 DFVLHNSLFLIAHFHNTIIGGVVFGVLAGIVYWFPKAFGYRLDPFWGKLSFWFWFIGFYF 476

Query: 440 AFFPMHFVGLAGMPRRI---PDYNLQFADFNMVSSIGAFMFG-ATQIFFLFIVIKCIRGG 495
           AF P++ +GL G+ RRI    D +LQ   + ++++ GAF+       F + +++  ++  
Sbjct: 477 AFMPLYILGLMGITRRISQFEDNSLQI--WFVIAAFGAFLIALGIASFIIQLIVSFLKRD 534

Query: 496 --APAPAKPWDGAEGLEWSIPSPAPYHTFQTPPEV 528
                   P++ A  LEWS  SP P + F   P +
Sbjct: 535 QLRDVTGDPYN-ARTLEWSTSSPPPQYNFAFTPVI 568