Pairwise Alignments

Query, 375 a.a., cytochrome c oxidase subunit 2 from Pseudomonas putida KT2440

Subject, 342 a.a., Cytochrome c oxidase subunit 2 from Xanthobacter sp. DMC5

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 79/275 (28%), Positives = 120/275 (43%), Gaps = 51/275 (18%)

Query: 90  TVVPFLILVVMAIPATKTLIDIYDASESDIDVQVTGYQWKWHYKYLGQDVEFFSNLATPT 149
           TVV     V ++    + LI +    E D+ ++VT +QW W  +Y   + E    +    
Sbjct: 98  TVVVLTGFVGLSFAVDRQLIAL--DREVDLVIRVTAHQWWWEVRY---ENEVPGLVFATA 152

Query: 150 DQIHNKAPKDEHYLLEVDQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNE 209
           ++IH                  +PVG  VR  + ++DVIHS W P  A KRD IPG    
Sbjct: 153 NEIH------------------VPVGRSVRLDLGSSDVIHSVWFPNLAGKRDVIPGRDQS 194

Query: 210 AWTRIEKPGIYRGQCTELCGKDHGFMPVVVEVKSKADYDTWLGERKAEAAKLKELTSKEW 269
              R +K G++RG+C E CG  H FM + +  + + D+  W   ++A AA      S   
Sbjct: 195 LTLRADKEGVWRGRCAEFCGNQHAFMGLTLVAEPEQDFVRWQEAQRAPAA------SPST 248

Query: 270 TLEELVERGDKVY-HTTCVACHQAEGQ------GLPPMFPALK-----GSKIATGPKEGH 317
            +E    RG +V+    C  CH   G       G+ P    LK     G+ +A   ++G+
Sbjct: 249 AVE---ARGMRVFLDGPCAMCHVIRGTPATGAGGIAPDLTHLKSRDTIGAGVAPN-RKGY 304

Query: 318 LS---IVFHG-KPGTAMAAFGKQLSEVDIAAVVTY 348
           L    +  HG KPG  M    +     D  A++ Y
Sbjct: 305 LGGWILDPHGLKPGVHMPPVPQ--DSADFQALLAY 337