Pairwise Alignments

Query, 375 a.a., cytochrome c oxidase subunit 2 from Pseudomonas putida KT2440

Subject, 322 a.a., Cytochrome c oxidase polypeptide II (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score = 88.2 bits (217), Expect = 3e-22
 Identities = 95/365 (26%), Positives = 140/365 (38%), Gaps = 66/365 (18%)

Query: 2   MRHPHVWMGLLLWSVFGQANAAWTVNMHPGATEVSNAVFDLHMTIFWICVIIGIVVFGAM 61
           MR+P  W+  +     G  NA  +  +H    E         +      +I+ I++    
Sbjct: 1   MRNP--WLWTISLRGLGACNAQQSA-LHVFGAEARQVREMAILLTIGAAIILSIMI---- 53

Query: 62  FWSMVIHRRSTGQQAAHFHEHTWVEILW--TVVPFLIL---VVMAIPATKTLIDIYDASE 116
              ++  R     + A  H      ILW   + P LIL   ++ A+PA +      D + 
Sbjct: 54  ---LIYVRALRAPEGALSHHGGMRIILWLGAIGPALILGALLLCALPAMRPR----DTAP 106

Query: 117 SDIDVQVTGYQWKWHYKYLGQDVEFFSNLATPTDQIHNKAPKDEHYLLEVDQPLVLPVGA 176
            D+ ++V G Q+ W   Y                     A +    L+  ++ + LPVG 
Sbjct: 107 GDLTIRVEGEQFWWRVAY--------------------GASRAGPGLVSANE-IRLPVGR 145

Query: 177 KVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRIEKPGIYRGQCTELCGKDHGFMP 236
            V   + A DVIHS+W+P  A K D IPG  N    R EK G +RG C E CG  H  M 
Sbjct: 146 TVILELGAQDVIHSFWIPGLAGKMDMIPGRTNRLVVRAEKAGRFRGVCAEFCGLSHALMA 205

Query: 237 VVVEVKSKADYDTWLGERKAEAAKLKELTSKEWTLEELVERGDKVYHT-TCVACHQAEGQ 295
             V   + AD+D WL + +     L               RG  ++    C ACH   G 
Sbjct: 206 FDVIAMNPADFDAWLADARGAGRGLGS------------SRGQSLFDAHGCGACHAIRGT 253

Query: 296 GLPPMF-PALK--GSKIATG-----PKEGHLSIVFH----GKPGTAMAAFGKQLSEVDIA 343
                  P L   G +   G     P   +++         KPG  M A+  QLSE +  
Sbjct: 254 AHDAAIGPDLSRFGQRRTLGAGILPPTTANIAAFIRAPQIAKPGARMPAY-PQLSEQEAI 312

Query: 344 AVVTY 348
           A+  Y
Sbjct: 313 AIAHY 317