Pairwise Alignments

Query, 375 a.a., cytochrome c oxidase subunit 2 from Pseudomonas putida KT2440

Subject, 335 a.a., Cytochrome c oxidase polypeptide II (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score =  174 bits (441), Expect = 3e-48
 Identities = 98/224 (43%), Positives = 132/224 (58%), Gaps = 17/224 (7%)

Query: 49  ICVIIGIVVFGAMFWSMVIHRRSTGQQAAHFHEHTWVEILWTVVPFLILVVMAIPATKTL 108
           +  II + V   M + MV +RRS     +    +T +E++WT+VP LIL+V+AIP+   L
Sbjct: 108 LITIISVFVLLLMLYVMVRYRRSANPVPSKTSHNTVIEVVWTLVPVLILLVIAIPSIGLL 167

Query: 109 IDIYDASESD-IDVQVTGYQWKWHYKYLGQDV-EFFSNLATPTDQIHNKAPKDEHYLLEV 166
            D Y  +  D + V+VTGYQW W Y+Y    + EF SN+  P D+        E YLL  
Sbjct: 168 ADQYKPAPKDALTVKVTGYQWYWGYEYPDNGIPEFVSNML-PEDKAKENG---EPYLLAP 223

Query: 167 DQPLVLPVGAKVRFLVTAADVIHSWWVPAFAVKRDAIPGFVNEAWTRIEKPGIYRGQCTE 226
           D  LVLPVG  V+ ++T ADVIHS+ VP+  VK DA+PG +NE    IEKPG+Y GQC+E
Sbjct: 224 DNRLVLPVGRPVKLIITGADVIHSFAVPSLWVKMDAVPGRLNEKSFTIEKPGVYYGQCSE 283

Query: 227 LCGKDHGFMPVVVEVKSKADYDTWL-----------GERKAEAA 259
           LCG  HGFMP+ +E    A +D W+            E+ AEAA
Sbjct: 284 LCGARHGFMPIAIEALPPAQFDQWVQSQGGTLKGAAAEKTAEAA 327