Pairwise Alignments

Query, 352 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 364 a.a., Radical SAM domain protein from Variovorax sp. SCN45

 Score =  358 bits (920), Expect = e-104
 Identities = 195/361 (54%), Positives = 246/361 (68%), Gaps = 12/361 (3%)

Query: 2   IPPVPQKGRGTAHNPHNRFAPGHSVAEDDGW--------YQEVPQTQGTEVRIETAKSVI 53
           IP    KGRG A    +RF+     A DDGW          E  Q   TEVR E  KS +
Sbjct: 6   IPIHAIKGRGAATQLAHRFSKDERNAFDDGWGTLEEGVAEAEELQPIATEVRFEDVKSAL 65

Query: 54  SRNTSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGLDFETKLIAKTNAAEVLAQ 113
           + N SPD+ FDRS+NPYRGCEHGCIYC+ARP+H+Y +LSPGLDFETKLIAK N  EVL  
Sbjct: 66  NENESPDIYFDRSLNPYRGCEHGCIYCFARPTHSYLNLSPGLDFETKLIAKRNLVEVLRT 125

Query: 114 QLSKPGYVCAPINLGSNTDPYQPIEREQLLTRRLLEVLLRFRHPVTIVTKGSLVLRDLDL 173
           +L +  Y  + I +G+ TD YQPIERE  +TR ++E+L   RHP  +VTK S + RDLDL
Sbjct: 126 ELGRRSYKPSYIAIGTATDCYQPIERELRITRSVIELLRETRHPFALVTKSSAIERDLDL 185

Query: 174 LAEMARQRLARVMISLTTLDDGLKRVLEPRAASPGARLRAIRVLREAGVPVGVLCSPMIP 233
           +A MA  RL  V I++TTLD  L R LEPRAA+P  RLR IR L EAGVPVGV  +P IP
Sbjct: 186 IAPMAADRLVAVYITVTTLDGELARKLEPRAAAPHRRLRTIRTLTEAGVPVGVSVAPQIP 245

Query: 234 MINDSELERLLEAAKEAGAQSAAYMMLRLPLEVAPLFEQWLQDHYPQRAAHVLSLIRQSR 293
            + + ++E++LEAA EAGA+SA Y ++RLP EVAPLF++WL  HYPQRA  +++ I + R
Sbjct: 246 FVTE-DMEQVLEAAWEAGARSAFYTVVRLPWEVAPLFKEWLALHYPQRADRIMARIHEMR 304

Query: 294 GGELYDSRFGVRMRGEGVFAELLAQRFAKAMKRLDFEGREAQELDCSAFCPPG--GQMAL 351
           GG+ YD+ F  RM+G G++A+L+ QRF KA  RL F  RE   LD ++F PPG  GQ +L
Sbjct: 305 GGKDYDADFATRMKGSGLWADLVHQRFQKATNRLGF-NRERIPLDITSFRPPGVVGQGSL 363

Query: 352 F 352
           F
Sbjct: 364 F 364