Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional regulator TrpI from Pseudomonas putida KT2440

Subject, 306 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  141 bits (355), Expect = 2e-38
 Identities = 98/301 (32%), Positives = 152/301 (50%), Gaps = 15/301 (4%)

Query: 1   MAHDLPPLNALRAFEATARLNSVSQAAEALHVTHGAVSRQIKVLEEHLGVALFVKDGRGI 60
           M+  LPPL ALRAFEA +R NS ++AAE L +T  AVSR I+ LEEH    LF + GR +
Sbjct: 1   MSRRLPPLYALRAFEAASRHNSFTRAAEELSITQSAVSRHIRTLEEHFACRLFQRSGRTL 60

Query: 61  KLTDAGMRLRDASGEAFDRLRSVCSELSRDVSEAPFVLGCSGSLLARWFIPRLGRLQADL 120
           +LT+A   L     E F  L   C  L+ +  +    +    +L  RW + RL R +A  
Sbjct: 61  QLTEAARLLLPGVREGFAALERACHTLNAE--DDILRMKAPSTLTMRWLLARLSRFRALQ 118

Query: 121 PELRLHLSA---GEGDLDPRRPGLDALLVYAEPPWPADMQVHVLAEECIGPVLSPHFAGF 177
           P   + L++      ++D  +   D  ++ +   +PAD +   L  E + PV +P+    
Sbjct: 119 PGNEVQLTSAWMSVDEVDFNQEPFDCAVLLSYGHFPADWEASYLFPELLIPVGAPNL--- 175

Query: 178 QRLQGAP--AKALLGEALLHTTSRPQAWPTWVVQQGL-EPAAIHYGQAFEHLYYLLEAAV 234
             L+  P   + L    LLH T   + W  W+ + GL    ++  GQ F+ L   + AA 
Sbjct: 176 --LEDGPWDVERLATAELLHPTPDRRDWRNWLERMGLSSQVSLKGGQVFDTLELGMIAAA 233

Query: 235 AGLGVAIAPQPLVADDLRAGRLSAPW--GFSPTQAALALWVPRRAADGRAEQLAQWLRAE 292
            G GV++    +VA+D+  GRLS PW    +  ++   +W   R    R  +LA++L+AE
Sbjct: 234 RGYGVSMGDLLMVAEDVAQGRLSLPWPTAVASGESYYLVWPKTRPGGERLRRLAEFLQAE 293

Query: 293 L 293
           +
Sbjct: 294 V 294