Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional regulator TrpI from Pseudomonas putida KT2440

Subject, 288 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  122 bits (307), Expect = 7e-33
 Identities = 92/291 (31%), Positives = 140/291 (48%), Gaps = 18/291 (6%)

Query: 4   DLPPLNALRAFEATARLNSVSQAAEALHVTHGAVSRQIKVLEEHLGVALFVKDGRGIKLT 63
           DLPPL ALRAFEA AR  S  +AA  L VT  A+S Q++ LE+HLG  LF++  R I LT
Sbjct: 6   DLPPLLALRAFEAVARHLSFIKAASELSVTQSALSHQVQKLEQHLGKPLFIRRTRAIDLT 65

Query: 64  DAGMRLRDASGEAFDRLRSVCSELSRDVSEAPFV-LGCSGSLLARWFIPRLGRLQADLPE 122
             G +  D    A D + +  +   R    A  + +G   S    W  PRL       P 
Sbjct: 66  ADGQQYYDEIRPALDAI-AAATRTQRVAPRATVLRIGLLASFATLWLAPRLAGFLTRYPH 124

Query: 123 LRLHLSAGEGDLDPRRPGLDALLVYAEPPWPADMQVHVLAEECIGPVLSPHFAGFQRLQG 182
           +++ L       +     +D  + Y +  WP D+Q   L +E I PV SP    F+ +Q 
Sbjct: 125 IQVELLPSIQLANVAAAEVDLAIRYGKGDWP-DVQATRLMQEVISPVCSP---TFKAMQD 180

Query: 183 APAKALLGEALLHTTSRPQAWPTWVVQQGLEPAAIHYGQAFEHLY-YLLEAAVAGLGVAI 241
           +P        L+ T+ RP  W  W     ++ A  H+ +   H Y  ++EAAVAG G+A+
Sbjct: 181 SP-------LLMATSHRPFEWTDWSAHYQVDLA--HHPRVMLHDYNIVVEAAVAGQGIAM 231

Query: 242 APQPLVADDLRAGRLSAPWGFSPTQAALALWV--PRRAADGRAEQLAQWLR 290
               L+   L+ G L   + + P  + +  W+  P+ + +  A   ++WL+
Sbjct: 232 GRHRLIERRLQDGSLVEAFDWPPYHSDIGYWLIAPQGSTNEAAACFSRWLK 282