Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional regulator TrpI from Pseudomonas putida KT2440

Subject, 312 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  129 bits (325), Expect = 7e-35
 Identities = 96/298 (32%), Positives = 141/298 (47%), Gaps = 15/298 (5%)

Query: 6   PPLNALRAFEATARLNSVSQAAEALHVTHGAVSRQIKVLEEHLGVALFVKDGRGIKLTDA 65
           PPLN LRAF    R   VS+AAEALH+T GAVS+Q++ LE  +G  LF ++ + + LT A
Sbjct: 8   PPLNLLRAFSTVVRFGGVSRAAEALHLTQGAVSKQVQELERWIGAPLFERNRKRLALTPA 67

Query: 66  GMRLRDASGEAFDRLRSVCSEL--SRDVSEAPFVLGCSGSLLARWFIPRLGRLQADLPEL 123
           G R   A      +L +   EL  S D   A   L    +  A+W IPRL   Q   P++
Sbjct: 68  GERYEKAVRALLAQLEAATLELITSGDGGGA-LHLSTLPTFGAKWLIPRLPDFQRAHPQI 126

Query: 124 RLHLSAGEGDLDPRRPGLDALLVYAEPPWPADMQVHVLAEECIGPVLSPHFAGFQRLQGA 183
            LH        D  RP LD  +++ +  WP   Q H LA + +  +++P  A  +     
Sbjct: 127 TLHFVPFVHGYDFERPELDCAILFGDGHWPG-AQSHYLAGQDVA-LIAPRAAQAEVAIRT 184

Query: 184 PAKALLGEALLHTTSRPQAWPTWVVQ---QGLEPAAIHYGQAFEHLYYLLEAAVAGLGVA 240
           P        L H T  PQ+W  W      +GL+P A   G  F+    ++ A + G+GVA
Sbjct: 185 PQDVARCTLLRHVTV-PQSWLQWSETHGVRGLDPLA---GPQFDQFQTMIRAVMVGMGVA 240

Query: 241 IAPQPLVADDLRAGRLSAP---WGFSPTQAALALWVPRRAADGRAEQLAQWLRAELAR 295
           + P+ LV D++ +G +  P    G+   +     +   R      +    WL AE+ R
Sbjct: 241 LVPRCLVQDEISSGLVDEPLPGGGYRGNEGYWFCYPEGRGQLATLDHFRSWLLAEVDR 298