Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional regulator TrpI from Pseudomonas putida KT2440

Subject, 294 a.a., putative LysR-type transcriptional activator protein from Pseudomonas putida KT2440

 Score =  129 bits (324), Expect = 8e-35
 Identities = 88/293 (30%), Positives = 146/293 (49%), Gaps = 5/293 (1%)

Query: 3   HDLPPLNALRAFEATARLNSVSQAAEALHVTHGAVSRQIKVLEEHLGVALFVKDGRGIKL 62
           H  P ++ L AFEA AR  S ++AA  L +T  AVSRQ++ LE+ LG+ LF ++GR ++L
Sbjct: 5   HLTPSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGRQVQL 64

Query: 63  TDAGMRLRDASGEAFDRLRSVCSE-LSRDVSEAPFVLGCSGSLLARWFIPRLGRLQADLP 121
           TD G   +    EA  R+RS   + L+         L    +  ++W +PRL    +  P
Sbjct: 65  TDVGRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFYSAHP 124

Query: 122 ELRLHLSAGEGDLDPRRPGLDALLVYAEPPWPADMQVHVLAEECIGPVLSPHFAGFQRLQ 181
            + +H+ +    ++     +DA +  A    P  +   + AEE +  V+ P  AG     
Sbjct: 125 GMLVHIHSRIETINFDTSEIDAAIGVASHDLPGLVCHRLHAEELV--VILPPEAGVGSQG 182

Query: 182 GAPAKALLGEALLHTTSRPQAWPTWVVQQGLEPAAIHYGQAFEHLYYLLEAAVAGLGVAI 241
            +PA+ +  E LL+  + P AW  W    GL   A+  G +FE   +L++A  AG+G+ +
Sbjct: 183 WSPAR-ISEEVLLNVANNPHAWGEWFSHHGLPHRAMRLGPSFELTSHLIQAVRAGIGIGL 241

Query: 242 APQPLVADDLRAGRLSAPW-GFSPTQAALALWVPRRAADGRAEQLAQWLRAEL 293
            P+ LV ++L  G L +P   F+  ++   ++ PR  A         WL  ++
Sbjct: 242 VPRILVEEELAKGELYSPGVAFASQRSYYLIYPPRNEALPSLRAFRGWLLEQI 294