Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional regulator TrpI from Pseudomonas putida KT2440

Subject, 291 a.a., putative transcriptional regulator from Pseudomonas putida KT2440

 Score =  128 bits (322), Expect = 1e-34
 Identities = 94/259 (36%), Positives = 131/259 (50%), Gaps = 10/259 (3%)

Query: 5   LPPLNALRAFEATARLNSVSQAAEALHVTHGAVSRQIKVLEEHLGVALFVKDGRGIKLTD 64
           LPPL AL  F  TA+  + ++A + LH+T GAVSRQI  LEEHLG ALF ++ RG+ LT 
Sbjct: 4   LPPLPALHTFLVTAQHCNFTRAGQQLHITQGAVSRQIAALEEHLGYALFKREARGLSLTR 63

Query: 65  AGMRLRDASGEAFDRLRSVCSELSRDVSEAPFVLGCSG-SLLARWFIPRLGRLQADLPEL 123
            G+       + F    ++  +  R+V E    L     + + RW +PRL   QA  P++
Sbjct: 64  EGLDWLPRVQQVF----ALIEQGVREVGEHSTTLQLKAPTCVMRWLLPRLMEWQALRPDV 119

Query: 124 RLHLSAG-EGDLDPRRPGLDALLVYAEPPWPADMQVHVLAEECIGPVLSPHF-AGFQRLQ 181
            + L+   +  +D RR G DA +VY + P    +QV  L +E + PV +P    G   LQ
Sbjct: 120 PVELTTTVQHGVDLRREGFDAAVVYGDAP-NHGLQVRKLFDEQLTPVCAPSLREGPVPLQ 178

Query: 182 GAPAKALLGEALLHTTSRPQAWPTWVVQQGLEPAAIHYGQAFEHLYYLLEAAVAGLGVAI 241
               + L    LLH +     W  W+   G+  A     Q FE L   +  A  G GVAI
Sbjct: 179 --QVEDLARHMLLHPSRDEHDWRLWLQAAGMTLATHGPKQHFETLDMAMAMASQGTGVAI 236

Query: 242 APQPLVADDLRAGRLSAPW 260
               L+ DDLR GRL  P+
Sbjct: 237 GDWSLIGDDLRGGRLCMPF 255