Pairwise Alignments

Query, 298 a.a., HTH-type transcriptional regulator TrpI from Pseudomonas putida KT2440

Subject, 305 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  202 bits (514), Expect = 8e-57
 Identities = 120/290 (41%), Positives = 165/290 (56%), Gaps = 14/290 (4%)

Query: 5   LPPLNALRAFEATARLNSVSQAAEALHVTHGAVSRQIKVLEEHLGVALFVKDGRGIKLTD 64
           LPPLNA R F+  A+  S  +AAE LHVTHGAVSRQI++LEE LGV LF +  R I LT 
Sbjct: 3   LPPLNAFRYFDIAAQTESFVRAAEHLHVTHGAVSRQIRLLEESLGVELFERRNRAIFLTP 62

Query: 65  AGMRLRDASGEAFDRLRSVCSELSRDVSEAPFVLGCSGSLLARWFIPRLGRLQADLPELR 124
           AG  L+  +   F++L      L +   +   VL C  ++  RW IPRL R  A  P+L+
Sbjct: 63  AGRALQGTTQAIFEQLEGAVQRLQQQARDNVLVLSCEPTIAMRWLIPRLPRFHATHPDLQ 122

Query: 125 LHLSAGEGDLDPRRPGLDALLVYAEPPWPADMQVHVLAEECIGPVLSPHFAGFQRLQGAP 184
           LHL A  G LD  R G+D  +   +  W   +    + +E IGPV  P          A 
Sbjct: 123 LHLVAAGGPLDFARSGVDLAIRRDDFHWDNQLYSQKICDEWIGPVCHP----------AA 172

Query: 185 AKALLGEALLHTTSRPQAWPTWVVQQGLEPAAIHYGQA-FEHLYYLLEAAVAGLGVAIAP 243
              L G+ LLH+T+RP AWPTW+   G +  A H  ++ +EH Y  ++AA AGLG+AIA 
Sbjct: 173 CARLDGQRLLHSTTRPAAWPTWLRLSGQQ--ARHCERSDYEHFYLSIQAASAGLGLAIAS 230

Query: 244 QPLVADDLRAGRLSAPWGFSPTQAALALWVPRRAAD-GRAEQLAQWLRAE 292
             +V D+L +G+L AP+GF    +A  L  P+  AD G+ ++ A+W+  E
Sbjct: 231 ALMVRDELDSGQLQAPFGFVRDGSAYHLLSPQPLADSGKRQRFAEWIMDE 280