Pairwise Alignments

Query, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

Subject, 283 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  128 bits (321), Expect = 2e-34
 Identities = 89/286 (31%), Positives = 143/286 (50%), Gaps = 15/286 (5%)

Query: 5   SAAVFALALSATTAHAADSDAQCSTVKMADPGWSD-IASTNAVARLLLESLGYQVKIDSL 63
           +AA   +A+S+T A A   D++  ++   D GWSD +A+T+  A ++   LGY VK+ ++
Sbjct: 9   AAATLVVAMSSTLASA---DSKTLSIGYVD-GWSDSVATTHVAAEVIKSKLGYDVKLQAV 64

Query: 64  AVPIIYGGLKDGQVDAFLGNWMPAQQGFHDKFIANGD-VQQLSRNLEGTEFTLAVPDYVW 122
           A  I++ G+  G++DA L  W+P   G  + +  N D V     N +  +  L VP+YV 
Sbjct: 65  ATGIMWQGVATGKLDAMLSAWLPVTHG--EYWAKNKDKVVDYGPNFKDAKIGLIVPEYVK 122

Query: 123 NAGVKDFADLQKHAGQFDKKLYGIGSGAPANLSLKAIIDKNEFNLGQWKLVESSEQAMLA 182
              ++D     K    F  K+ GI +G+   L     I   ++ L  +KL  SS  AM+A
Sbjct: 123 AKSIEDL----KTDTTFKNKIVGIDAGSGVMLKTDEAI--KQYGL-DYKLQASSGAAMIA 175

Query: 183 QVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFGSKGEVYTLTRKGYPQACPNAA 242
           ++ RA  KQ+ I   GW PH M  K K+ +L   +  +G+   V ++  KG  +  P  A
Sbjct: 176 ELTRAEDKQESIAVTGWVPHWMFAKWKLRFLDDPKGIYGAAETVNSIGSKGLEKKAPEVA 235

Query: 243 KLLGNLKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDGWL 288
             L   ++    E   +   + +    D AAK WV  HPER+  W+
Sbjct: 236 AFLKKFQWASKDEIGEVMLAIQEGAKPDAAAKDWVAKHPERVAEWV 281