Pairwise Alignments

Query, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

Subject, 315 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein from Pseudomonas putida KT2440

 Score =  265 bits (678), Expect = 8e-76
 Identities = 140/309 (45%), Positives = 196/309 (63%), Gaps = 7/309 (2%)

Query: 5   SAAVFALALSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQVKIDSLA 64
           S  + AL  +   A AA+ + QC TV+ +D GW+DI  T A   ++LE+LGY+     ++
Sbjct: 6   SLLLVALLSAPLLAQAAEPE-QCQTVRFSDVGWTDITVTTATTSVVLEALGYKTHTTMIS 64

Query: 65  VPIIYGGLKDGQ-VDAFLGNWMPAQQGFHDKFIANGDVQQLSRNLEGTEFTLAVPDYVWN 123
           VP+ Y  L  G+ +D FLGNWMP  +    ++   G V+ +  NLE  ++TLAVP  +++
Sbjct: 65  VPVTYKSLATGKDLDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVPQALYD 124

Query: 124 AGVKDFADLQKHAGQFDKKLYGIGSGAPANLSLKAIIDKNEFNLGQ--WKLVESSEQAML 181
            G+KDF+D+ K   + D K+YGI  G   N +++++IDKN F L    +K+V+SSE  ML
Sbjct: 125 KGLKDFSDIPKFKKELDGKIYGIEPGNDGNRTIQSMIDKNAFGLKDAGFKIVQSSEAGML 184

Query: 182 AQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFG---SKGEVYTLTRKGYPQAC 238
           +QVDRA K+ + + FLGW PHPMN + KM YLTGG+ +FG    K  V T TRKGY Q C
Sbjct: 185 SQVDRAQKRGEALVFLGWEPHPMNTRFKMQYLTGGDDFFGPDFGKATVLTNTRKGYTQEC 244

Query: 239 PNAAKLLGNLKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDGWLAGVTTKADGD 298
            N  +LL NL F L  E+++M  V+D K+  + AAK W+K +P +LD WLAGVTT     
Sbjct: 245 SNVGQLLKNLSFELKDESTMMGYVLDDKMKPEAAAKKWIKDNPGKLDAWLAGVTTVDGKP 304

Query: 299 ALEAVKAKL 307
            LEAVKAKL
Sbjct: 305 GLEAVKAKL 313