Pairwise Alignments

Query, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

Subject, 315 a.a., choline ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  303 bits (775), Expect = 4e-87
 Identities = 149/286 (52%), Positives = 199/286 (69%), Gaps = 3/286 (1%)

Query: 21  ADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQVKIDSLAVPIIYGGLKDGQVDAF 80
           A  DA+C+TV  +DPGW+DIA+TNA++ ++L +LGYQ K+ +L+V + + GLK GQVD F
Sbjct: 24  AVDDARCATVTQSDPGWTDIAATNAISGVVLNALGYQQKVQNLSVALAFQGLKTGQVDVF 83

Query: 81  LGNWMPAQQGFHDKFIANGDVQQLSRNLEGTEFTLAVPDYVWNAGVKDFADLQKHAGQFD 140
           LGNWMPAQ     KF A+G +  L  NL    FTLAVPDYV  AGVKDFADLQK+A QFD
Sbjct: 84  LGNWMPAQAPVISKFTADGSISVLGANLPAARFTLAVPDYVAAAGVKDFADLQKYANQFD 143

Query: 141 KKLYGIGSGAPANLSLKAIIDKNEFNLGQWKLVESSEQAMLAQVDRAVKKQQFITFLGWT 200
            K+YGI  GAPAN SLK +ID ++F L  W LVESSE  MLAQV RAV+++Q+I FLGW 
Sbjct: 144 HKIYGIAPGAPANQSLKKMIDAHDFALQNWSLVESSESGMLAQVTRAVERKQWIVFLGWE 203

Query: 201 PHPMNVKLKMHYLTGGEKWFGS---KGEVYTLTRKGYPQACPNAAKLLGNLKFTLDMENS 257
           PH MN + K+ YL+GG+ +FG+   +  V T+TRK +   CPN  +    L F + +EN+
Sbjct: 204 PHAMNTRFKLAYLSGGDNYFGANYGRATVNTVTRKDFAATCPNLNRFYSQLTFDVALENA 263

Query: 258 IMAEVVDKKISFDEAAKAWVKAHPERLDGWLAGVTTKADGDALEAV 303
           ++A V++++ +  +AA+  +K  PE LD WL GVTT+    A  AV
Sbjct: 264 VIARVLEQQQTAQDAARDELKKRPELLDSWLEGVTTRTGEPAKPAV 309