Pairwise Alignments

Query, 307 a.a., putative choline betaine-binding protein from Pseudomonas putida KT2440

Subject, 308 a.a., ABC transporter, substrate binding protein (glycine betaine) from Agrobacterium fabrum C58

 Score =  254 bits (650), Expect = 1e-72
 Identities = 141/310 (45%), Positives = 190/310 (61%), Gaps = 7/310 (2%)

Query: 1   MHKFSAAVFALALSATTAHAADSDAQCSTVKMADPGWSDIASTNAVARLLLESLGYQVKI 60
           M   SAA   LA   + A AAD+DA C  V+MA+PGW+D+A T  +A  LL+SL YQ + 
Sbjct: 1   MKVVSAAALVLA-GESPAFAADADA-CKMVRMAEPGWNDLAFTTGIAMTLLKSLHYQPQS 58

Query: 61  DSLAVPIIYGGLKDGQVDAFLGNWMPAQQGFHDKFIANGDVQQLSRNLEGTEFTLAVPDY 120
             L + +IY  LK   +D F+G W PA   ++  +  +G V+++  NL G ++T AVP Y
Sbjct: 59  QLLGIDVIYTSLKSKDLDVFMGYWDPAMVNYYKPYKEDGSVEKVRTNLVGAKYTFAVPTY 118

Query: 121 VWNAGVKDFADLQKHAGQFDKKLYGIGSGAPANLSLKAIIDKNEFNLGQWKLVESSEQAM 180
           VW AGVKDF+DLQK A +FD+KLYGI  G+   L L A+ D     L  W++VESSEQ M
Sbjct: 119 VWEAGVKDFSDLQKFADKFDRKLYGIEPGS-NQLMLDAVKDP-ALGLKDWEVVESSEQGM 176

Query: 181 LAQVDRAVKKQQFITFLGWTPHPMNVKLKMHYLTGGEKWFG---SKGEVYTLTRKGYPQA 237
           L+QV R  + + FI F GW PHPMN K  + YLTGG+K++G       V T  R+GY Q 
Sbjct: 177 LSQVARFNRNKTFIVFQGWAPHPMNAKFDIKYLTGGDKFYGPDFGAATVDTQVRRGYLQE 236

Query: 238 CPNAAKLLGNLKFTLDMENSIMAEVVDKKISFDEAAKAWVKAHPERLDGWLAGVTTKADG 297
           CPN AKLL NL+F ++ EN  M  +++  +S ++AA   +KA P RL+ WL  V      
Sbjct: 237 CPNVAKLLQNLEFDVEFENKGMDLIMNGGLSPEDAAAQAIKAEPHRLETWLKDVFALDGQ 296

Query: 298 DALEAVKAKL 307
           + L  VKA L
Sbjct: 297 NGLATVKAAL 306