Pairwise Alignments

Query, 274 a.a., shikimate 5-dehydrogenase from Pseudomonas putida KT2440

Subject, 301 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

 Score = 91.3 bits (225), Expect = 2e-23
 Identities = 85/274 (31%), Positives = 123/274 (44%), Gaps = 14/274 (5%)

Query: 4   YVVFGNPIGHSKSPLIHRLFAEQTGQDLEYATLLAPLDEFSDCARGFFKQGSGGN--VTV 61
           + V GNP+   K+PL       + G D     L        D  RG    GS G   VTV
Sbjct: 24  FPVVGNPVAQVKAPLAFNALFRRAGIDALVVPLELQPASVLDTCRGLLDSGSIGGLLVTV 83

Query: 62  PFKEEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDNTDGAGLVRDLTVNAGVELAGKR 121
           P+K+  F L       AR  GAVN + + A+G + GD  DG G V  L   AG E AG++
Sbjct: 84  PYKKTLFELVAQPGEPARLVGAVNAIRRSAEGAIAGDLFDGIGFVAGLRA-AGHEPAGRK 142

Query: 122 ILILGAGGAVRGVLEPILAHKPQSLVIANRTVEKAEQLAREFDE--LGPVVASGFAWLQE 179
           +L++GAGGA   V   +L+     L + +    +AE LA        G  V S     + 
Sbjct: 143 VLLVGAGGAGSAVAAALLSAGVAWLGLFDVHTAQAEALAAHLQSRFSGSTVVSLRTLSEV 202

Query: 180 PVDVIINATSASL-AGELPPIADSLVEAGRTVCYDMMYGKEPTPFCQWATKLGAAKVLDG 238
             D+ +NAT   +  G+  P+  + + AG T+  D++     TP  + A + G   V  G
Sbjct: 203 DCDIAVNATPLGMKPGDPLPLDPAALPAG-TLVVDVIMQPAETPLLRHAAQRG-LPVHPG 260

Query: 239 LGMLAEQAAEAFFIWRGVRPDTAPVLAELRRQLA 272
             ML  Q   A+  + G+     P  A+L R +A
Sbjct: 261 RPMLDHQ-LPAYLDFFGL-----PQAAQLARHVA 288