Pairwise Alignments

Query, 274 a.a., shikimate 5-dehydrogenase from Pseudomonas putida KT2440

Subject, 298 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 80.9 bits (198), Expect = 3e-20
 Identities = 90/277 (32%), Positives = 117/277 (42%), Gaps = 19/277 (6%)

Query: 6   VFGNPIGHSKSPLIHRLFAEQTGQDLEYATLLAPLDEF--SDCARGFFKQGSGG----NV 59
           + G  I  S+SP +H   A+  G  L Y  L A    +   D  R     G+ G    NV
Sbjct: 20  LIGQGIAGSRSPHMHETEAKALGLTLVYRILDADRMGYRADDLPRLLPMLGAMGFDGINV 79

Query: 60  TVPFKEEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDNTDGAGLVRDLTVNAGVELAG 119
           T PFK+    L DSL+  AR  GAVNT+    +G   GDNTD +G              G
Sbjct: 80  THPFKQAVIPLLDSLSDAARALGAVNTI-LFRNGQAHGDNTDWSGYRAHFLAGLADRPRG 138

Query: 120 KRILILGAGGAVRGVLEPILAHKPQSLVIANRTVEKAEQLAREFDELGPVVASGFAWLQE 179
            RI ++GAGGA   V    L      L I +   E+A  LA     L P  A+    +  
Sbjct: 139 -RIAMIGAGGAAAAVGYAHLDLGATHLAIVDPAQERAAALADRLGALFP--AARVQAMAH 195

Query: 180 PVDVIINA---TSASLAGELP----PIADSLVEAGRTVCYDMMYGKEPTPFCQWATKLGA 232
             D I +A      S  G L     P    L+   + V  D++Y    TP    A   G 
Sbjct: 196 AADAIADADGVVQTSPIGMLSHPGLPFDPDLLTPDQWVS-DIIYFPLHTPLLVAAQAKGC 254

Query: 233 AKVLDGLGMLAEQAAEAFFIWRGVRPDTAPVLAELRR 269
           A +L G GM   QAA AF ++  V PD   +LA+  R
Sbjct: 255 A-ILTGGGMAVMQAAHAFALFTSVAPDCDRMLADFAR 290