Pairwise Alignments

Query, 274 a.a., shikimate 5-dehydrogenase from Pseudomonas putida KT2440

Subject, 289 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 90/280 (32%), Positives = 120/280 (42%), Gaps = 33/280 (11%)

Query: 6   VFGNPIGHSKSPLIHRLFAEQTGQDLEY------------ATLLAPLDEFSDCARGFFKQ 53
           + G  I  SKSP +H       G D  Y            ++L A LDE    ARGF   
Sbjct: 11  LIGADIQLSKSPALHMREGAAHGLDYSYELVDVTARKLPQSSLPALLDELE--ARGF--- 65

Query: 54  GSGGNVTVPFKEEAFRLCDSLTPRARRAGAVNTLSKLADGTLQGDNTDGAGLVRDLTVNA 113
            +G N+T PFK+        L+  AR  GAVNT+    DG   G NTD  G      V  
Sbjct: 66  -AGTNITHPFKQAVIPHLHELSDDARMLGAVNTV-VFRDGRRIGHNTDWYGFYESF-VRG 122

Query: 114 GVELAGKRILILGAGGAVRGVLEPILAHKPQSLVIANRTVEKAEQLAREFDELGPVVASG 173
             +    R L++GAGGA   V    L      L I +R   +AE+LA   DEL      G
Sbjct: 123 LPDAKRDRALLVGAGGAGVAVAHAALKLDIIRLDIFDRDFPRAERLA---DELNARFGEG 179

Query: 174 FAW-LQEPVDV------IINATSASL-AGELPPIADSLVEAGRTVCYDMMYGKEPTPFCQ 225
            A+ +++P D       +I+AT   + A    P+A  L+E    V  D++Y    T    
Sbjct: 180 RAFAVKDPADSLPFADGLIHATPMGMPAHPGMPVAAELIEQKHWVA-DIVYMPLVTELLA 238

Query: 226 WATKLGAAKVLDGLGMLAEQAAEAFFIWRGVRPDTAPVLA 265
            A   G  + L G GM   QA  AF ++ G  PD   + A
Sbjct: 239 TAASKG-CRTLPGGGMTVFQAVGAFRLFCGREPDAKRMTA 277