Pairwise Alignments

Query, 104 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 548 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 2/99 (2%)

Query: 4   SLEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLARCVEQDPKYSAAWKLLGKAYQLQ 63
           +  K+ A   D+P+  + LG A    G   EAA  L RC + DP   A W +LG   + Q
Sbjct: 97  NFRKVAAARPDDPVPHYNLGLALRGLGRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQ 156

Query: 64  GELAAARKAWEDGIVAAQAHGDKQAEKEMTVFLKKLNKT 102
           G L  A    E  I     H    A   + V L+  ++T
Sbjct: 157 GRLDEAVTCLERAIQLDPGH--SMAYNNLGVALQAQDRT 193



 Score = 28.9 bits (63), Expect = 9e-05
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 5   LEKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLARCVEQDPKYSAA-WKL 55
           LE+ LA   D+P L + LG +  +    A+A     R +   P Y AA W L
Sbjct: 200 LERGLALQPDDPELHYSLGCSLQEATRTADATASYRRAIALRPDYGAAHWNL 251



 Score = 25.8 bits (55), Expect = 7e-04
 Identities = 20/54 (37%), Positives = 25/54 (46%)

Query: 6  EKMLAKGVDNPLLRFGLGKAWLDEGNGAEAAVHLARCVEQDPKYSAAWKLLGKA 59
          E+ML     N      LG      G+ A AA  LA+ V+QDP    A   LG+A
Sbjct: 31 ERMLGIDRRNTAAMHILGSVAFRRGDPAGAADLLAKVVKQDPGRIQAVITLGEA 84