Pairwise Alignments

Query, 550 a.a., choline dehydrogenase from Pseudomonas putida KT2440

Subject, 567 a.a., choline dehydrogenase from Pseudomonas simiae WCS417

 Score =  352 bits (904), Expect = e-101
 Identities = 211/531 (39%), Positives = 306/531 (57%), Gaps = 10/531 (1%)

Query: 10  FDYVVVGAGPAGCLLANRLSADPSCRVLLLEAGGRDNYPWIH--IPVGYLYCIGNPRTDW 67
           +DY++VGAG AG  LA RL+ D    VLLLEAGG D        +P    + +   R +W
Sbjct: 5   YDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 64

Query: 68  CFKTEAQPGLGGRALGYPRGKVLGGCSSINGMIYMRGQAADYDHWAA-QGNDGWAWKDVL 126
            ++T+ +P + GR +   RGK LGG S INGM Y+RG A DYD+WA   G + W + D L
Sbjct: 65  AYETDPEPHMDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLENWTYLDCL 124

Query: 127 PLFKASENHFAGASEHHGAEGEWRVERQRY-SWPILDAFRDAAEQSGIGKVDDFNTGDNQ 185
           P F+ +E    G ++ HG +G   V   +  + P+  A  +A  Q+G  + +D N    +
Sbjct: 125 PYFRKAETRDIGPNDWHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGYQQE 184

Query: 186 GCGYF-QVNQRSGVRWNASKAFLRPIKDRANLTVLTGVQVDQVLLDNTRARAVKALWQGA 244
           G G   +    +G R + ++ +L   K R+ LT++T    D+VL +  RA  V+ L   A
Sbjct: 185 GFGPMDRTVTPNGRRASTARGYLDTAKKRSTLTIVTHALTDKVLFEGKRAVGVRYLIGAA 244

Query: 245 WH--EFAARREIILCAGAVGSPGILQRSGIGPRQLLESLGIGVRHDMPGVGGNLQDHLQL 302
               E  AR+E+++C+GA+ SP +LQRSG+GP +LLESL I V HD+PGVG NLQDHL+L
Sbjct: 245 EERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLPGVGENLQDHLEL 304

Query: 303 RLIYQIRNTRTLNQMANSLW-GKMGMGLRYLYDRSGPLAMAPSQLGAFVRSSPEQATANL 361
            L Y    T+ ++   + LW  +  +G  +L++ +G  A    + G F+R+  E    N+
Sbjct: 305 YLQYAC--TQPVSLYPSLLWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRTREEFEWPNI 362

Query: 362 QYHVQPLSLERFGEPLHQFPAFTASVCNLRPASRGRIDICSTDMNSTPRIDPNYLSAPQD 421
           QYH  P+++   G    +   F A + ++R  SRGRI + S +    P I  NY++  QD
Sbjct: 363 QYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPSRGRIQLKSKNPRDYPSILFNYMATEQD 422

Query: 422 LRVAADAIRLTRRIVQAPALAAFEPKEYLPGPALQSEEDLFEAAGKIGTTIFHPVGTCRM 481
            +   D IRLTR I+Q PAL  +  +E  PG  +Q++E L +   +   T FHP  +C+M
Sbjct: 423 WQEFRDGIRLTREIMQQPALDPYRGREISPGIDVQTDEQLDKFIREHAETAFHPSCSCKM 482

Query: 482 GNGAMDVVDNQLRVHGIPGLRVADASIMPQITSGNTCSPTLMIAEKAAQLI 532
           G   M VVD + RVHG+ GLRV DASIMP IT+GN  +PT+MIAEK A  I
Sbjct: 483 GTDEMAVVDGEGRVHGMQGLRVVDASIMPIITTGNLNAPTIMIAEKIADKI 533