Pairwise Alignments

Query, 295 a.a., transcriptional regulator from Pseudomonas putida KT2440

Subject, 349 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  226 bits (576), Expect = 6e-64
 Identities = 123/287 (42%), Positives = 177/287 (61%), Gaps = 7/287 (2%)

Query: 2   FDWNDLRFFLELQRSGRLLTAAKRLNTTHSTVARHIESIEQSLGTALFVQHAQGYELTPS 61
           F+W+DL FFL + R+GRL  AA RL   HSTV+R I ++E +LG  LF +   GY LT +
Sbjct: 49  FEWSDLTFFLAVARAGRLTVAAARLKVEHSTVSRRIAALEAALGAKLFDRRPHGYALTAA 108

Query: 62  GQALLKHAEAMENVALLAQEEITQA-ITPLGKIRLGVTEGIGIMFFTPRMNALFERYPGL 120
           G  LL  AE ME +AL AQ EI  + +   G +R+G  +G G  F  PR+ AL + +P L
Sbjct: 109 GDRLLAAAEGMETLALSAQGEIAGSDLGVSGTVRIGAPDGFGTFFLAPRIGALSDLHPEL 168

Query: 121 EVELVAVPRFVSILNREAEISIHLERPNADLLITRKLTDYRLALYASQAYLDRAPPLRHR 180
           +++L+A+PR  S+  REA+I+I L RP    L  RKLTDYRL LYA++AYL++   +  R
Sbjct: 169 DIQLLAMPRLFSLSKREADIAISLSRPKEGRLHARKLTDYRLGLYAARAYLEKHGAIESR 228

Query: 181 EDLARHSWIGYVDDLLFSQELLFLNSFCRVPNVVFRSTSVIAQQAAARAGLGIAVLPNYM 240
             L RH +IGYVDDL+++ EL ++    +   V  +S+S++AQ  A RAG G+ VLP +M
Sbjct: 229 AALQRHRFIGYVDDLIYAPELDYVPLVAKDLRVRLKSSSLVAQMTATRAGAGVCVLPRFM 288

Query: 241 A-----RHDPTLVRVLPGET-IQRSYWICTRRELHKSVRLRVVWDYL 281
           A          LV +LP E  + R++W+ T  +     R+RV  D++
Sbjct: 289 ADLFAGEGPEGLVPILPTEVGLTRTFWLLTHTDTRDLARIRVAADFI 335