Pairwise Alignments

Query, 295 a.a., transcriptional regulator from Pseudomonas putida KT2440

Subject, 294 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  141 bits (356), Expect = 2e-38
 Identities = 96/281 (34%), Positives = 142/281 (50%), Gaps = 4/281 (1%)

Query: 4   WNDLRFFLELQRSGRLLTAAKRLNTTHSTVARHIESIEQSLGTALFVQHAQGYELTPSGQ 63
           W   R FL + R G L  AA++L  T  TV RHI ++E +LG  LF +   G   T   +
Sbjct: 7   WELYRSFLGVFREGSLSGAARQLGITQPTVGRHIAALETALGVVLFTRSPNGLLPTALAR 66

Query: 64  ALLKHAEAMENVAL-LAQEEITQAITPLGKIRLGVTEGIGIMFFTPRMNALFERYPGLEV 122
            L  HAE ME  A  L +   +Q     G +R+  +E +G+    P +  L + +P L V
Sbjct: 67  TLRAHAETMERTAAALERAASSQGDDVRGVVRVSASEVVGVEVLPPILTQLRQTHPHLRV 126

Query: 123 ELVAVPRFVSILNREAEISIHLERPNADLLITRKLTDYRLALYASQAYLDRAPPLRHRED 182
           ELV   R   +L  EA+I++ + RP+ + L+ R++    + L+A   YL +     H +D
Sbjct: 127 ELVLTNRLSDLLQLEADIAVRMVRPSQEQLLARRIGLIEIGLHARDDYLLKHGTPLHMQD 186

Query: 183 LARHSWIGYVDDLLFSQELLFLNSFCRVPNVVFRSTSVIAQQAAARAGLGIAVLPNYMAR 242
           LA HS IG+  +  F + L  +  F R       S S +AQ A  RAG GI      +A+
Sbjct: 187 LASHSVIGFDQENAFIRSLA-IKGFER-NTFACSSDSDLAQLALIRAGAGIGGCQVQLAK 244

Query: 243 HDPTLVRVLP-GETIQRSYWICTRRELHKSVRLRVVWDYLL 282
            DP L RVLP G  ++   W+    +L  S R RV++D L+
Sbjct: 245 RDPRLRRVLPEGVALRLDTWVTMHEDLRNSPRCRVMFDALV 285