Pairwise Alignments

Query, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  314 bits (804), Expect = 4e-90
 Identities = 176/454 (38%), Positives = 263/454 (57%), Gaps = 36/454 (7%)

Query: 6   PLYLAAVSALSGSYAISAQAEDKP-EGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKG 64
           PL+LA  + +     ++  A+  P +GF+EG+ L +  RN+Y NRD RD           
Sbjct: 9   PLFLAIAATI---VPLAHAADSTPADGFVEGAHLNINTRNYYMNRDRRDIHTDD------ 59

Query: 65  NTNGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDN 124
                S+ W    +  F SG+TQGTVGFG+DA AM+GLKLD G G +G      +LP  +
Sbjct: 60  -----SKEWGQGFLGIFESGYTQGTVGFGLDAHAMLGLKLDGGGGTDGS----SILPYGS 110

Query: 125 -KGEARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQ 183
             G+A   ++  GG  K+R FDT +K GD+F + PV+A G +R+LP++FRGV++ N S+ 
Sbjct: 111 GNGKAPGSFSTAGGTLKMRAFDTELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLD 170

Query: 184 GLTLQGGRLHAMSQPVSSNLNDNFVTFYGG---PVNSPWIGYGGGDYSINDNWTVSVYAS 240
           G   +GG+  + ++  + + +    T YG      +S  + + G  +S  D  T ++YA+
Sbjct: 171 GWMFEGGQA-SFTKLYNQSGHRRIGTSYGALPEHTDSQHMNWAGVSFSGIDGLTSNLYAA 229

Query: 241 QLKDVWNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGA 300
           +LKDVWNQYY      Y +++ ++L  G +YY   D G+  LG+ DNN +S    V  G 
Sbjct: 230 ELKDVWNQYYYDLDYTYVVNEMISLNPGLHYYHTQDTGQSLLGDIDNNTYSLHFTVDVGH 289

Query: 301 HTLALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGL 360
           H++  ++QR NG+  FDY+ Q DS+++DNS QYSDFN P ERSW L+Y  NF   G+PGL
Sbjct: 290 HSVTAAYQRVNGNTPFDYIAQGDSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLGLPGL 349

Query: 361 TFMTRYARG----SGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLS 416
           T    Y  G    +  D  +       + D      + K WERD+++KYVVQ G AKDL+
Sbjct: 350 TSAVSYISGKTDLTKVDPQSRGYSAWYSADG----KDAKHWERDIDLKYVVQGGKAKDLA 405

Query: 417 FRLRQATTRA----TAFESDLDETRVIIEYPLSI 446
            RL+ AT R     +A + D+DE RVI++YP+++
Sbjct: 406 VRLQWATNRGSNGYSAVDRDVDEYRVIVDYPINV 439