Pairwise Alignments

Query, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  243 bits (620), Expect = 8e-69
 Identities = 144/432 (33%), Positives = 226/432 (52%), Gaps = 34/432 (7%)

Query: 18  SYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEAWAHAI 77
           S A+   AE+   GF+E +S  +  RNF+FNR+  + T            G ++ W  + 
Sbjct: 17  SLALPVVAEE--HGFLEDASANLNLRNFFFNRNYTNPT---------KAQGGAQEWTQSF 65

Query: 78  ISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKGEARDEYTKVGG 137
           I    SGFTQGTVGFGVD   +  LKLD G G  G +    +LP+D+ G   DE+ ++G 
Sbjct: 66  ILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQ----LLPLDHDGRPADEFGRLGV 121

Query: 138 AAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQGGRLHAMSQ 197
           A K R+  T VKVG+  P  P++ S D R LP++ RG  + +  I GLTL GG+  A S 
Sbjct: 122 AFKARISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSP 181

Query: 198 PVSSNLNDNFVTFYGGPV-NSPWIGYGGGDYSINDNWT-VSVYASQLKDVWNQYYAGTSV 255
              S++ND  ++ +G     S    + G +Y+ ND  T + ++ +QLKD+++Q +     
Sbjct: 182 RDDSSMND--LSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIH 239

Query: 256 VYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTLALSHQRNNGDDD 315
             PL +   L     ++   D+G  R GE DN  WS     +YG +T  L  Q+  G+  
Sbjct: 240 SQPLGN-WTLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSA 298

Query: 316 FDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFMTRYARGSGADYS 375
           +  +  +    + N    + +++ +E+SW +R+D NF + G+PGLT M RY  GS     
Sbjct: 299 WMRVNGTSGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNV--- 355

Query: 376 NANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQATTRATAFESDLDE 435
                      +   + + K W R+ E+ Y VQ+G  K+L+ RLR ++ R     ++ DE
Sbjct: 356 -----------HTGTVTDGKEWGRESELGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDE 404

Query: 436 TRVIIEYPLSIL 447
            R+I+ YP+S+L
Sbjct: 405 NRLIVSYPISLL 416