Pairwise Alignments

Query, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  233 bits (595), Expect = 7e-66
 Identities = 145/439 (33%), Positives = 235/439 (53%), Gaps = 44/439 (10%)

Query: 20  AISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEAWAHAIIS 79
           A+ A+A  +  GFIEG+  T+  RN++F+RD  D           +T   ++ WA   I 
Sbjct: 23  ALCAEATAEEAGFIEGARATLQARNYFFSRDYADIKG-------ASTQSRTQEWAQGFIL 75

Query: 80  KFNSGFTQGTVGFGVDAFAMIGLKLDTGD--GRNGGRSSFDVLPVDNKGEARDEYTKVGG 137
             +SG+TQGT+G GVD   ++G KLD+     R+G      +LP  + G++ DEY+++G 
Sbjct: 76  NASSGYTQGTLGVGVDVTGLLGFKLDSSPEHARSG------LLPSLDSGKSADEYSRLGA 129

Query: 138 AAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQGGRLHAMSQ 197
           A K ++  T +KVG++ P+ PV+   D RLLP +++G  +E+    GLTL  G+  + S 
Sbjct: 130 AIKFKVSQTELKVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFRSTSL 189

Query: 198 PVSSNLNDNFVTFYGGPVN--------SPWIGYGGGDYSINDNWT-VSVYASQLKDVWNQ 248
             SSN +         P+N        S    Y G DY+ NDN T V V+ +QL+D++ Q
Sbjct: 190 RDSSN-SQKMYALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDIYQQ 248

Query: 249 YYAGTSVVYPL-SDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTLALSH 307
            +       PL S  L +  G  Y+ A ++G K  G++DN+   +    + G HT  + +
Sbjct: 249 RFYSFKHAEPLGSWTLGVNAG--YFDAREDGSKVAGDYDNHALFSLFSAKTGGHTFYVGY 306

Query: 308 QRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFMTRYA 367
           Q+  GDD F  +  + +  + N++   +F++P ERSW +R+D NF + G+PGLT   RY 
Sbjct: 307 QQIGGDDGFIQVGANTNP-MGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLTSTLRYV 365

Query: 368 RGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQATTRAT 427
           +G             R  + G   + + R ERD+++ YVVQ+GP   L  R+R    R+ 
Sbjct: 366 KG-------------RDVETGLGFEGRDR-ERDLDLAYVVQSGPLAGLGIRVRNVMARSN 411

Query: 428 AFESDLDETRVIIEYPLSI 446
            + +D+DE R+I+ Y + +
Sbjct: 412 -YRTDIDENRLILSYTIKV 429