Pairwise Alignments

Query, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

Subject, 449 a.a., putative OprD family outer membrane porin from Pseudomonas putida KT2440

 Score =  342 bits (876), Expect = 2e-98
 Identities = 188/442 (42%), Positives = 259/442 (58%), Gaps = 27/442 (6%)

Query: 20  AISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYSEAWAHAIIS 79
           A  A A+   EGFI+G+ + VLNRNF+F++D R+    T N   G        W H II+
Sbjct: 18  ASPAFADSDDEGFIDGTRVHVLNRNFFFSQDYRNGDF-TLNPNNGERQSLHREWGHGIIA 76

Query: 80  KFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGR-----------SSFDVLPVDNKGEA 128
              SGFT+GTVGFGVD   ++GLKLD G+G  G             S+FD       GE 
Sbjct: 77  NLQSGFTRGTVGFGVDVQGLVGLKLDGGNGAVGNGVGVPGIVSRSGSNFD-------GEP 129

Query: 129 RDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQ 188
           +D Y KVG A KVR FDT ++ GDV P++PV+ + D RLLP++ RG    N S+ GL+LQ
Sbjct: 130 KDSYGKVGTALKVRAFDTELRYGDVSPTSPVLHASDIRLLPQTLRGFIFNNNSLDGLSLQ 189

Query: 189 GGRLHAMSQPVSSNLNDNFVTFYGGPVNSPW-IGYGGGDYSINDNWTVSVYASQLKDVWN 247
           GG+L + S   +SN   +  T Y G +     + Y GGDY  ND  T+ +++S+L DVWN
Sbjct: 190 GGKLESSSDRNASNHRGDLGTVYAGRIKGANDVVYLGGDYRFNDQLTLRLHSSRLDDVWN 249

Query: 248 QYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTLALSH 307
           Q +     V PL  +L+L  G NYY+  D G+   G+ DN+ WS   G+  GAH   LS+
Sbjct: 250 QSFFSVDHVQPLGSELSLKTGLNYYRTRDSGQALAGQIDNDSWSVHAGLAAGAHGFKLSY 309

Query: 308 QRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFMTRYA 367
            R +GD  FDY+  +  + +D + Q SDFN+P ER+W  RYD +F   G+PGL+   RY 
Sbjct: 310 TRIDGDTPFDYVWNTYDLQLDAASQVSDFNNPNERAWEARYDYDFAPLGVPGLSLTARYV 369

Query: 368 RGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQATTRA- 426
           RG+  D + A   Y       N  ++ + WER++ +KYV+Q+GPAKDLSF L QAT R  
Sbjct: 370 RGTDIDGTRAGGAY----SYFNGTEDGRHWERNLWLKYVLQSGPAKDLSFNLMQATHRVG 425

Query: 427 --TAFESDLDETRVIIEYPLSI 446
                ES++DE R+I++YPL I
Sbjct: 426 GDHVAESNVDELRLIVQYPLDI 447