Pairwise Alignments

Query, 423 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

Subject, 454 a.a., Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC from Variovorax sp. SCN45

 Score =  247 bits (631), Expect = 5e-70
 Identities = 164/426 (38%), Positives = 236/426 (55%), Gaps = 12/426 (2%)

Query: 2   PRYNRNVLPKTPVSPWKIAALCAVISGLMAPAAL--AQSISLPQALSTAMDANPDLAAAR 59
           P Y++ V P  P +    ++     S   A   L  A  ++L  A++ A+ ANP LAAA 
Sbjct: 17  PAYSQQVTPSVPAAAGSSSS-SPQASSRPATRTLEPAGPLTLRSAVAMALRANPGLAAAS 75

Query: 60  QEIGIADGARKQAGLIPNPTISYDVEDTRRNTSQTTVSLSQTLELGGKRGARVDVATYGQ 119
           +E    + A  QAG  PNPT+   +ED RR+   TT+ LSQ +ELGGKR ARV  A   +
Sbjct: 76  REQDATEAAIVQAGAWPNPTLDAQLEDLRRDNRTTTLQLSQPIELGGKRAARVTAAERAR 135

Query: 120 TAAQLELDRRVNGLRADVVQAFYAALRAQTGLDLAKQSLELTERGLRIVDGRVRAGKSSP 179
             A   L  R   +RA  + AF+  L AQ  L LA+ S+ L +   R    RV AGK SP
Sbjct: 136 DQAASALAGRRAEIRASTITAFFDVLTAQERLRLAQDSVGLAQTATRAATNRVAAGKVSP 195

Query: 180 VEATRAQVQLAEAQLQVRRAETEKATAYQQLAQITGSSVTVFDRLESPT-LSPGLPPRTE 238
           +E TRA+V  A  ++++ +AE    +A QQLA + G+    F ++E      P + P  +
Sbjct: 196 LEETRARVAEAGTRVELLQAEGTLRSARQQLAALWGNPDPRFTQVEGAVDQLPAMAP-AQ 254

Query: 239 DLLAKLDQTAEMRQAVVQIDKSDASLGSEKAQRIPNLTVSVGSQ----YDRSV---RERV 291
           +L  +L     + QA +++++  A    E+A+RIP++TVS+G++     D  V   R   
Sbjct: 255 NLGVRLAAAPVVVQARLEVERRKALSDLEQAKRIPDVTVSLGAKRVPASDGEVGGSRRNQ 314

Query: 292 NTVGLSMPLPLFDRNQGNILSASRRADQARDQRNAVELRLRTETQTALNQWSTAMQEVES 351
             VGLS+PLP+FD N+GN+  A  R ++ARD   A EL+L TE   A  +  +A    E+
Sbjct: 315 VVVGLSVPLPIFDTNRGNVAEALSREEKARDDLAAAELQLGTEVAQATERLRSARATAET 374

Query: 352 YDKTILPSAQQAVETATRGFEMGKFGFIEVLDAQRTLIVARGQYLESLAAATNARAQVER 411
                LP A+ A + AT+GFE+GKF F+E LDAQRTL   R QYL SLA A  A  +++R
Sbjct: 375 LQHDALPGAETAYKAATKGFELGKFSFLEALDAQRTLFQVRAQYLLSLADAHRAAGELDR 434

Query: 412 VYGEVG 417
           + G  G
Sbjct: 435 LLGNEG 440