Pairwise Alignments

Query, 416 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

Subject, 416 a.a., RND efflux system, membrane fusion protein from Variovorax sp. SCN45

 Score = 90.5 bits (223), Expect = 8e-23
 Identities = 85/336 (25%), Positives = 148/336 (44%), Gaps = 29/336 (8%)

Query: 86  KAAGVALEAAAPRDLGTVVSFPGEIRFDEDRTAHVVPRVPGVVEAVQANLGETVKKGQVL 145
           +A  V++   A  ++     F G  R +      V  RV G V+AV    G  VK+G +L
Sbjct: 51  QATPVSVATVASSEINAWDEFSG--RLEAVERVDVRSRVAGAVQAVHFREGALVKQGDLL 108

Query: 146 AVIA----SQQISDLRSEQQAAQRRVELARVTFEREKQLWQDKISAEQDYLQARQALQEA 201
             I     + ++    ++  +AQ R   +R   ER K+LW DK  A++++ +   A +EA
Sbjct: 109 VTIDPAPYAAEVERAEAQVASAQARQSFSRSEQERAKRLWDDKAIAQREFDERVNAGREA 168

Query: 202 EISLANAKQKVGAIGASVNSVGGNRYELRAPFDAVVVEKHLTVGEVVSEATNAFILSDLN 261
           + +L  A+  + +   ++        ++RAP    +    +TVG +V+    A +L+ L 
Sbjct: 169 DANLRAAQASLQSARLNLGYT-----QVRAPVSGRIGRIEVTVGNLVAAGPGAPVLTTLV 223

Query: 262 QVWATFAVPPTD-------LGKVTTGRAVKVSSPDMNVEV----------EGKVGYVGSL 304
            V   +A    D       L  + TG + +     + V++           GK+  + + 
Sbjct: 224 SVSPIYASFDADEQVITRALKDLPTGSSARGQIESIPVQMGTAGLDGTPFTGKLQLIDNQ 283

Query: 305 LGEQNRAATVRVTLTNPNGAWRPGLFVNIAVTSQTDRVAVAVPEHAVQTVEDKPSVFVRT 364
           +  ++    VR +  N +GA  PG F  I +       A+ V E A+ T ++K  V V  
Sbjct: 284 VDAKSGTVRVRASFDNKDGALIPGQFARIRMGQARSDSALLVSERAIGTDQNKKFVMVVG 343

Query: 365 PDGFDT-RPVKLGRRDNGYVEIIDGIEAGAQVATSG 399
            D   T R V LG   NG   +  G++AG +V  +G
Sbjct: 344 EDSKATYREVTLGASINGLRVVSKGLKAGDRVIVNG 379