Pairwise Alignments

Query, 416 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

Subject, 421 a.a., RND efflux system, membrane fusion protein from Variovorax sp. SCN45

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 87/336 (25%), Positives = 143/336 (42%), Gaps = 31/336 (9%)

Query: 87  AAGVALEAAAPRDLGTVVSFPGEIRFDEDRTAHVVPRVPGVVEAVQANLGETVKKGQVLA 146
           A  V +  AAP D+G V   PG  R +  R A V  R  G++   +   G  VK GQ+L 
Sbjct: 48  APEVGVVVAAPGDVGLVTELPG--RLEASRVAQVRARASGILLKREFREGSDVKAGQLLF 105

Query: 147 VIASQQISDLRSEQQAAQRRVEL----ARVTFEREKQLWQDKISAEQDYLQARQALQEAE 202
            I    ++      QA   R E     A+   +R K L +    ++Q+Y  A  + + AE
Sbjct: 106 RIDPAPLAAALQNAQATLARAEANAVQAKALADRYKPLVEANAVSKQEYATAVASQKTAE 165

Query: 203 ISLANAKQKVGAIGASVNSVGGNRYELRAPFDAVVVEKHLTVGEVVS--EATNAFILSDL 260
             +A+ +  V     ++        ++ +P    +    +T G +V   EAT   ++  +
Sbjct: 166 ADVASGRAAVQTAKINLGYA-----DVTSPISGRIGRALVTEGALVGQGEATELAVVQQI 220

Query: 261 NQVWATFAVPPTDLGKVTTGRA--------------VKVSSPD-MNVEVEGKVGYVGSLL 305
           N V+  F    TD+ K+    A              V+V   D     +EGK+ +    +
Sbjct: 221 NPVYVNFTQSATDVLKLRRALADGQYKRAGSEEAASVRVVLEDGSEYALEGKLLFSDLTV 280

Query: 306 GEQNRAATVRVTLTNPNGAWRPGLFVNIAVTSQTDRVAVAVPEHAVQTVEDKPSVFVRTP 365
                   +R  + NP G   PGL+V + +       A+ +P+ AV   +   +V V   
Sbjct: 281 DSTTGQIMLRAEVPNPKGELLPGLYVRVRLEQAQATNAITLPQQAVTRTQQGDTVTVVDK 340

Query: 366 DG-FDTRPVKL-GRRDNGYVEIIDGIEAGAQVATSG 399
           DG    R VK+   +DN +V ++DG++AG QV   G
Sbjct: 341 DGKLSKRNVKISAAKDNQWV-VLDGLKAGEQVMVDG 375