Pairwise Alignments

Query, 416 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

Subject, 415 a.a., RND efflux system, membrane fusion protein from Variovorax sp. SCN45

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 83/325 (25%), Positives = 154/325 (47%), Gaps = 22/325 (6%)

Query: 80  LSAEQIKAAGVALEAAAPRD--LGTVVSFPGEIRFDEDRTAHVVPRVPGVVEAVQANLGE 137
           L A   + A   ++ A PR    G  +S PG ++      + +  R  G ++    ++G 
Sbjct: 62  LEAGTTERAKQYVQTALPRTPTAGQTLSLPGTLQGFVQ--SPISARASGYLKRWTKDIGS 119

Query: 138 TVKKGQVLAVIASQQISDLRSEQQAAQRR----VELARVTFEREKQLWQDKISAEQDYLQ 193
            V+KG++LA I + +I    S+  AA+ +    +ELAR T +R + L +  + ++Q+  +
Sbjct: 120 RVEKGELLAEIETPEIDQQLSQAVAARAQAASGLELARSTADRWEALRKKDVVSQQELDE 179

Query: 194 ARQALQEAEISLANAKQKVGAIGASVNSVGGNRYELRAPFDAVVVEKHLTVGEVVSEATN 253
            R A+ +A  ++A A   V  +     + G  R  + APF  V+  +++ VG+++   + 
Sbjct: 180 RRSAVAQATSNVAAADANVQRL---KQTEGFKR--VVAPFAGVITRRNVDVGDLIDAGSG 234

Query: 254 A------FILSDLNQVWATFAVPPTDLGKVTTGRAVKVSSPDMNVEV-EGKVGYVGSLLG 306
                  F+L+  + +     VP      V  G+ V V+  ++  +  +G+V      + 
Sbjct: 235 GGAGRALFLLAQTDPLRVYINVPQAYAQLVKAGQPVVVTQAELRGQTFKGQVARTAGSID 294

Query: 307 EQNRAATVRVTLTNPNGAWRPGLFVNIAVTSQTDRVAVAVPEHAVQTVEDKPSVFVRTPD 366
              R   V V+L N +GA  PG +V +++     R  ++VP +A+    +   + V  P 
Sbjct: 295 TTTRMMQVEVSLPNSDGALLPGAYVQVSLPLAASR-TLSVPSNALLFRAEGTRIAVVDPQ 353

Query: 367 G-FDTRPVKLGRRDNGYVEIIDGIE 390
           G  + R V LGR     VE+IDG+E
Sbjct: 354 GRVNLRAVTLGRNYGENVEVIDGLE 378