Pairwise Alignments

Query, 416 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

Subject, 376 a.a., CzcABC family efflux RND transporter, membrane fusion protein from Variovorax sp. SCN45

 Score =  113 bits (282), Expect = 1e-29
 Identities = 82/312 (26%), Positives = 142/312 (45%), Gaps = 4/312 (1%)

Query: 88  AGVALEAAAPRDLGTVVSFPGEIRFDEDRTAHVVPRVPGVVEAVQANLGETVKKGQVLAV 147
           A + + A   + +   +S PG I    ++   V   V G +  +Q  LG++VK G  L  
Sbjct: 57  ASLQVAAVESQQVQRPISAPGSIEAAPEKLVKVTSPVTGRIVKLQRALGDSVKAGDPLFT 116

Query: 148 IASQQISDLRSEQQAAQRRVELARVTFEREKQLWQDKISAEQDYLQARQALQEAEISLAN 207
           + S  +S    +   A+  +  A+  F R+K L++  I+A +DY  A  A   A      
Sbjct: 117 LDSADLSSAFGDATKAEATLRQAQRDFARQKLLFEADITARKDYEAAELAFGAATSDAQV 176

Query: 208 AKQKVGAIGASVNSVGGNRYELRAPFDAVVVEKHLTVGEVVSEA-TNAFILSDLNQVWAT 266
            K ++  +GA         Y LR+P    V+E     G   ++       ++DL+ V+ T
Sbjct: 177 TKNRLAQLGAGTGGGSHRDYVLRSPISGRVIEMTGAQGGYWNDINAPVMTVADLSTVFLT 236

Query: 267 FAVPPTDLGKVTTGRAVKVS-SPDMNVEVEGKVGYVGSLLGEQNRAATVRVTLTNPNGAW 325
            +V   D+  +  G+  ++  S   +   +G V Y+G +L    R   VRV + N  G +
Sbjct: 237 ASVSEKDIAALRVGQKARIDLSAYPDQAFDGTVKYIGEVLDADTRTVKVRVAVDNRQGRF 296

Query: 326 RPGLFVNIAVTSQTDRVAVAVPEHAVQTVEDKPSVFV-RTPDGFDTRPVKLGRRDNGYVE 384
           RPG+F  +  + +    A+ VP  A+        VFV + P  F+ R V +G      +E
Sbjct: 297 RPGMFAKVVFSGEA-HPALTVPASALVQSGLYTKVFVEKGPFAFEARKVAVGPVIGDRIE 355

Query: 385 IIDGIEAGAQVA 396
           I+ G++AG ++A
Sbjct: 356 ILSGLQAGERIA 367