Pairwise Alignments

Query, 416 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

Subject, 407 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  127 bits (319), Expect = 6e-34
 Identities = 95/388 (24%), Positives = 186/388 (47%), Gaps = 20/388 (5%)

Query: 47  EKKAASAAKEEGDEGHGEEGHSEEGGEEEG--KLTLSAEQIKAAGVALEAAAPRDLGTVV 104
           E  +A  A E   E H E GH EEG  EEG  ++ LS  + ++ G+ ++    R L  VV
Sbjct: 22  ESNSADKAGEASHEAHNEGGHEEEGHNEEGMAEVHLSNLKFESLGIKIDTIPTRSLSGVV 81

Query: 105 SFPGEIRFDEDRTAHVVPRVPGVVEAVQANLGETVKKGQVLAVIASQQISDLRSEQQAAQ 164
              G++       A V   +   V +++   G+ V+KGQVLA ++   +++L++    A 
Sbjct: 82  EANGQLEVPPQHEATVTAILGANVNSIKVIEGDKVRKGQVLAYLSHPNLTNLQTNYVKAY 141

Query: 165 RRVELARVTFEREKQLWQDKISAEQDYLQARQALQEAEISLANAKQKVGAIGASVNSV-G 223
            R +      +R+K+L+++++ + + Y +        +  +   + ++  +  ++ ++ G
Sbjct: 142 SRFQYLEKEMQRQKRLYEEEVGSGKTYQETLADYNSMKGEVKGYEAQLKQLNLNIENIQG 201

Query: 224 GNRYE---LRAPFDAVVVEKHLTVGEVVSEATNAFILSDLNQVWATFAVPPTDLGKVTTG 280
           G+ YE   + +P    V +  + +G+ V   T  F++ +++ + A   V   D+ KV  G
Sbjct: 202 GDIYEYVPVVSPIKGYVEKVKVQLGQYVDPQTVMFMIVNIDHIHADLMVFEKDVHKVKKG 261

Query: 281 RAVK--VSSPDMNVEVEGKVGYVGSLLGEQNRAATVRVTLTNPNGAWRPGLFVNIAVTSQ 338
           + +   V S   N  +  K+  VG    ++ +A  V   +        PG+++N  + + 
Sbjct: 262 QKLSFTVESVPGNT-LTAKIYSVGKQFEQKPKAVHVHAEIDQKEDFLIPGMYINGKIRTG 320

Query: 339 TDRVAVAVPEHAVQTVEDKPSVFV--------RTPDGFDTRPVKLGRRDNGYVEI--IDG 388
             +V  A+PE A+   E KP +F+        +T   F    V+ G  ++G+VEI  ++ 
Sbjct: 321 NTQVK-ALPESAIIEEEGKPYIFMAEAHEEDGKTEWAFKAVEVRTGINEDGWVEIKLLEP 379

Query: 389 IEAGAQVATSGSFTLKSELGKASAEHGH 416
           +  G QVA + ++ L SE+ K+   H H
Sbjct: 380 LPDGTQVAWNNAYYLISEMKKSQTSHSH 407