Pairwise Alignments

Query, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

Subject, 1054 a.a., Copper/silver efflux RND transporter, transmembrane protein CusA from Variovorax sp. SCN45

 Score =  647 bits (1668), Expect = 0.0
 Identities = 373/1050 (35%), Positives = 600/1050 (57%), Gaps = 32/1050 (3%)

Query: 1    MFERIIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M  ++IR++I  R +V++A  +++  G+YS  + P+DA+PD+++VQV I T+ PG +P  
Sbjct: 1    MIAKLIRWSIANRFLVLLATAMLSAWGVYSVLRTPLDALPDLSDVQVIIRTSYPGQAPRI 60

Query: 61   TEQRITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDIFFARQLINERLQVAKEQ 120
             E +IT+P+ T M  +PG +  R  S  G S V V+F+DGTD+++AR  + E L   + +
Sbjct: 61   VENQITYPLTTTMLSVPGAKTVRGYSFFGDSFVYVLFEDGTDLYWARSRVLEYLNQVQSR 120

Query: 121  LPEGVEAVMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRNVPG 180
            LP   +A +GP +TG+G I+ +       A+ + G     + LR +QDW +K +L+ VP 
Sbjct: 121  LPAAAKASLGPDATGVGWIYQY-------ALVDRGGTQDASQLRALQDWFLKYELKTVPN 173

Query: 181  VAEINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLLIRA 240
            VAE+ +IGG  +Q+ V  DP++LA Y++     V A++  N   G   +E    + ++RA
Sbjct: 174  VAEVASIGGMVRQYQVVLDPEKLAAYRIPHTKAVEAIQKANQETGGSVLELGEAEYMVRA 233

Query: 241  PGQVGNIEDIANIVITSVD-GAPIRISSVADVSIGKELRTGAATENGR-EVVLGTVFMLI 298
             G +  +ED   I + + D G  +R+  VA + +G E+R G    +G  E V G + M  
Sbjct: 234  SGYLQGLEDFRKIPLMTTDAGVSVRLGDVARIQVGPEMRRGIGELDGEGEAVGGVIVMRS 293

Query: 299  GENSRTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAIL 358
            G+N+     AV  KL  +  +LPKGV  V  YDR+NL+E+A+  +   L+E  I+V  + 
Sbjct: 294  GKNALETITAVKEKLQTLQASLPKGVEIVPTYDRSNLIERAVRNLGFKLLEEFIVVAVVC 353

Query: 359  FLFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLG--ALDFGIIVDGAVVIVEN 416
            F+FL ++R+A +  + +P+ +L  F  M    V+AN+MSLG  A+  G +VD AVV++EN
Sbjct: 354  FIFLFHLRSAFVAIVSLPIGILAAFIVMRYQGVNANIMSLGGIAIAIGAMVDAAVVMIEN 413

Query: 417  AIRRLAHAQHKHGRMLTKTERFHEVFA-AAREARRPLIFGQLIIMVVYLPIFALTGVEGK 475
            A + +   +H H     + E    V A +A E    L F  LII + ++P+F L   EG+
Sbjct: 414  AHKHIEKWKHDHPDQTLRGETHWRVIADSAAEVGPALFFSLLIITLSFIPVFTLEAQEGR 473

Query: 476  MFHPMAFTVVMALLGAMVLSVTFVPAAIAMFVTGKVKEEE-GVVMRTARLRYEPVLQWVL 534
            MF P+AFT   A+  A  LSVT +P  +   + G++ +E+   + R     Y+P+L  VL
Sbjct: 474  MFSPLAFTKTYAMAAAAGLSVTLIPVLMGYLIRGRIPDEKTNPLNRLLIAVYQPLLNAVL 533

Query: 535  GHRNIAFSAAVALVVLSGLLASRMGSEFIPSLSEGDFAMQAMRVPGTSLTQSVEMQQRLE 594
                +  + A  ++VLS      +G EF+P L EGD       +PG S  ++ E+ Q+ +
Sbjct: 534  RWPKLTLAGAAVVLVLSLWPLQHIGGEFMPRLDEGDLLYMPSALPGLSTGKAGELLQQTD 593

Query: 595  KAVIAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQDQWPNPKKPRDELIAEVQK 654
            + +I  VPEV  ++ ++G AE A+DP P    +  I  KP++QW      +D+L+ E+ +
Sbjct: 594  R-LIKTVPEVASVYGKAGRAESATDPAPIEMFETTIQFKPREQW-RAGMTQDKLVEELDR 651

Query: 655  AAAGVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVLNNTANKIAAALKAVPGS 714
                VPG       PI+ R + L +G++S V VKV G D+  ++    +I   LK VPG 
Sbjct: 652  IVK-VPGLTNIWVPPIRNRIDMLATGIKSPVGVKVAGTDLATIDRITGEIERVLKDVPGV 710

Query: 715  SEVKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGGRQAGTLYEGDRRFDMVV 774
            S    E+ +G   + +NI R++A+R+G+NIADVQ+ IA AVGG   G   EG +RF + V
Sbjct: 711  SSALAERLTGGRYVDVNIKRDEASRFGMNIADVQSVIASAVGGENIGETVEGLQRFPINV 770

Query: 775  RLPETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLDLQLGPNQISRENGKRLV 834
            R P  +R  +  + SL    P    +GA  +    LS VA++ +  GP  +  EN +   
Sbjct: 771  RYPREIRDSLEQLRSL----PIVTERGARLV----LSDVADIRITDGPPMLRSENARLSG 822

Query: 835  IVSANVRGRDLGSFVEEATASLDKKVQIPAGYWTTWGGQFEQLQSAAKRLQIVVPVALLL 894
             V  ++RGRDL S V++    + K+V++P GY  +W GQFE L+ A  +L++VVP  LL+
Sbjct: 823  WVYVDIRGRDLRSAVQDMQRVVTKEVKLPPGYAVSWSGQFEFLERATAKLKVVVPFTLLI 882

Query: 895  VMTLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSISAGVGFIALSGVAVLNGL 954
            +  LL+L F    + +L+   +PFAL GG+  L+L    LS++  VGFIAL+GV+   G+
Sbjct: 883  IFVLLYLTFKRFDEALLIMAALPFALVGGIWLLYLLSYNLSVAGAVGFIALAGVSAEFGV 942

Query: 955  VMIAFIRGL----REEGRT----LRQAVDEGALTRLRPVLMTALVASLGFIPMALATGTG 1006
            +M+ +++       +EG+T    L  A+ EGA+ R+RP  MT  V   G  P+   TGTG
Sbjct: 943  IMLLYLKHAWDERVDEGKTSTADLLDAIREGAVLRVRPKAMTVAVILAGLFPIMWGTGTG 1002

Query: 1007 AEVQRPLATVVIGGILSSTALTLLVLPALY 1036
            +EV + +A  ++GG++++  L++ V+PA Y
Sbjct: 1003 SEVMQRIAAPMVGGMITAPLLSMFVIPAAY 1032