Pairwise Alignments

Query, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

Subject, 1043 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

 Score =  683 bits (1762), Expect = 0.0
 Identities = 397/1051 (37%), Positives = 608/1051 (57%), Gaps = 38/1051 (3%)

Query: 1    MFERIIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M ER++     +R +  I    +A  G   +++LPI+A PDI +V  Q+ T  PG +  E
Sbjct: 1    MIERLVTLCFHRRGIAWIVFAFVALYGWTCWKQLPIEAYPDIADVTSQVVTQVPGLAAEE 60

Query: 61   TEQRITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDIFFARQLINERLQVAKEQ 120
             EQ+IT P+E  +   PGL   RS S  GLS + V+FKDG + +++RQ + ER  ++   
Sbjct: 61   VEQQITVPLERELLSTPGLHVLRSKSTFGLSLIVVVFKDGVEGYWSRQRLQER--ISGVT 118

Query: 121  LPEGVEAVMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRNVPG 180
            LP G    +   ++ +GEI+ +T+E++   ++E         L  +Q W + P+L+ V G
Sbjct: 119  LPHGATPGLDAYTSPIGEIYRYTLESKTRDLRE---------LSELQSWTVIPRLKKVSG 169

Query: 181  VAEINTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLLIRA 240
            V ++   GG   QF+++ DP RL  Y +TL  +  A+ +NN + G   + R  +  ++R 
Sbjct: 170  VIDVANFGGLTTQFMLSLDPARLVQYGVTLQQIKDAINANNGSAGGSLMNRGEQAYVVRG 229

Query: 241  PGQVGNIEDIANIVITSVDGAPIRISSVADVSIGKELRTGA-ATENGREVVLGTVFMLIG 299
             G +G+++D+ N+V+T+  G P+ +  +  +S G   R G    ++  + V G   +L  
Sbjct: 230  TGLIGSLQDMGNVVVTAKSGTPVLVKDLGTLSYGNVERRGILGKDDNPDTVSGITLLLKD 289

Query: 300  ENSRTVSQAVAAKLADIN-RTLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAIL 358
              +  V + V A + D+N   LPK V  V   DR  L+     TV K L EG +LV  +L
Sbjct: 290  AQASQVIEGVHAAVKDLNDNLLPKDVKVVPYLDRAALIGATTHTVGKTLAEGIVLVTLVL 349

Query: 359  FLFLGNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLGALDFGIIVDGAVVIVENAI 418
             L LG+ RAA I A+ IPLSML  F  M +  V ANL+SLGA+DFGI+VDGAVV+VE  +
Sbjct: 350  LLSLGSPRAAAIVALTIPLSMLIAFVFMRHLNVPANLLSLGAIDFGILVDGAVVLVEGIL 409

Query: 419  RRLAHAQHKHGRMLTKTERFHEVFAAAREARRPLIFGQLIIMVVYLPIFALTGVEGKMFH 478
            RR   AQ K    LT  +      AA  +  RP+ FG L+I+  YLP+FA   +E K+F 
Sbjct: 410  RRREEAQDKP---LTPAD----AIAATVQVARPIFFGMLVIIAAYLPLFAFQRIEYKLFS 462

Query: 479  PMAFTVVMALLGAMVLSVTFVP--AAIAMFVTGKVKEEEGVVMRTARLRYEPVLQWVLGH 536
            PMAF V  AL+GA+++++T +P  A +A    G+V     +   T  LRYE  L  VLG 
Sbjct: 463  PMAFAVGSALVGALLVALTLIPGLAYLAFRKPGRVFHNRPLEWLT--LRYEAFLSRVLGR 520

Query: 537  -RNIAFSAAVALVVLSGLLASRMGSEFIPSLSEGDFAMQAMRVPGTSLTQSVEMQQRLEK 595
             R +  +  +AL+ + GL    +G +F+P L EG   +Q    PG +L ++  +   L  
Sbjct: 521  GRWVVATCGLALLGVIGL-GGTIGRDFLPYLDEGSLWLQVTMPPGITLEKATALANELRS 579

Query: 596  AVIAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQDQWPNPKKPRDELIAEVQKA 655
            A   + PEV  +  ++G  +  +DP   +  +A + L P D W +    + ELI ++ + 
Sbjct: 580  AT-REFPEVSYIVTQTGRNDDGTDPWTVSHIEASVGLHPYDTWKSGMS-KQELIGKLAER 637

Query: 656  AAGVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVLNNTANKIAAALKAVPGSS 715
               +PG +    QP+     + +SG  SD+ VK++GD +D +   A  +   L+ VPG++
Sbjct: 638  YKQLPGFSVGFMQPMIDGVQDKLSGAHSDLVVKIYGDSLDEMRRIAGDVIGVLEKVPGAA 697

Query: 716  EVKVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGGRQAGTLYEGDRRFDMVVR 775
            +V ++Q   LP L I++DR  AARYG+N+ADV + I+  +GG   G +Y G++ +DM VR
Sbjct: 698  DVVIDQEPPLPNLKIDVDRAAAARYGINVADVSDLISTGMGGAAIGQVYVGEKSYDMTVR 757

Query: 776  LPETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLDLQLGPNQISRENGKRLVI 835
             PE  R D   ++ L++  P  A         +PL QVA++    G   I+RE+ +R + 
Sbjct: 758  FPEATRNDPDAIAGLMLTAPNGAK--------VPLGQVASVRTVSGETTITRESSRRHLT 809

Query: 836  VSANVRGRDLGSFVEEATASLDKKVQIP-AGYWTTWGGQFEQLQSAAKRLQIVVPVALLL 894
            V  N RGRDL SF+ +A +++++ V+     Y   WGGQFE L+ A  RL +++P+ L +
Sbjct: 810  VKLNARGRDLSSFLAQAQSAIERGVKYDHLRYQIAWGGQFENLERAQARLMVILPLTLAI 869

Query: 895  VMTLLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSISAGVGFIALSGVAVLNGL 954
            +  LLF  F NL+   +V   +P A+ GG+ AL LR + L++S+ VGFIAL GVAVLNG+
Sbjct: 870  MFLLLFAEFGNLRQPAMVLLVVPLAMLGGLAALHLRGMTLNVSSAVGFIALFGVAVLNGV 929

Query: 955  VMIAFIRGL-REEGRTLRQAVDEGALTRLRPVLMTALVASLGFIPMALATGTGAEVQRPL 1013
            +MI+ I  L RE+GR LR+AV EGA +R+RPVL+TA VA+ G  P  LA G G++VQRPL
Sbjct: 930  LMISQINRLRREDGRPLREAVIEGARSRIRPVLVTATVAAFGLTPAMLAMGLGSDVQRPL 989

Query: 1014 ATVVIGGILSSTALTLLVLPALYHWAHRKDE 1044
            ATVV+GG++++T LTL++LPALYH    + E
Sbjct: 990  ATVVVGGLVTATLLTLVLLPALYHLVETRAE 1020