Pairwise Alignments

Query, 1053 a.a., cation efflux system protein from Pseudomonas putida KT2440

Subject, 1046 a.a., Copper/silver efflux RND transporter, transmembrane protein CusA from Sphingobium sp. HT1-2

 Score =  636 bits (1641), Expect = 0.0
 Identities = 372/1045 (35%), Positives = 587/1045 (56%), Gaps = 33/1045 (3%)

Query: 5    IIRFAIEQRIVVMIAVLIMAGIGIYSYQKLPIDAVPDITNVQVQINTAAPGYSPLETEQR 64
            +IR+++  R  VMI VL + G+G+++ +   IDA+PD+++ QV I T+ PG +P   E +
Sbjct: 5    LIRWSVRNRFFVMIGVLTLIGVGVWAVRSTAIDALPDLSDTQVIIRTSYPGQAPQIVENQ 64

Query: 65   ITFPVETAMAGLPGLQQTRSLSRSGLSQVTVIFKDGTDIFFARQLINERLQVAKEQLPEG 124
            +T+P+ T M  +PG +  R  S  G S V VIF+DGTD+++AR  + E L   + +LP  
Sbjct: 65   VTYPLTTTMLSVPGAKTVRGYSFFGDSFVYVIFEDGTDLYWARSRVLEYLNQVQGRLPAS 124

Query: 125  VEAVMGPVSTGLGEIFLWTVEAEDGAVKEDGTPYTPTDLRVIQDWIIKPQLRNVPGVAEI 184
              + +GP +TG+G ++ + +    G        +  + LR +QDW ++ +L+ V GVAE+
Sbjct: 125  ARSALGPDATGVGWVYEYALVDRTGR-------HDLSQLRGLQDWFLRYELKTVTGVAEV 177

Query: 185  NTIGGYAKQFLVAPDPKRLATYKLTLNDLVAALESNNANVGAGYIERNGEQLLIRAPGQV 244
             +IGG  KQ+ V  DP +LA Y +T    V A++  N   G   +E    + ++R  G +
Sbjct: 178  ASIGGMVKQYQVLLDPVKLAAYGVTHAQTVDAIQKANQESGGSVLEMAEAEYMVRVSGYL 237

Query: 245  GNIEDIANIVI-TSVDGAPIRISSVADVSIGKELRTGAATENGR-EVVLGTVFMLIGENS 302
              ++D   I + T+  G P+R+  VA +  G E+R G A  NG  EV  G V +  G+N+
Sbjct: 238  KTLDDFRAIPLRTAAGGVPVRLGDVATIQAGPEMRRGIAELNGEGEVAGGVVILRSGKNA 297

Query: 303  RTVSQAVAAKLADINRTLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAILFLFL 362
            R    AV  KLA++ + LP GV  VTVYDR+ L+++A+  +   LVE  I+V  +  LFL
Sbjct: 298  RETIAAVKDKLAELKKGLPPGVDVVTVYDRSQLIDRAVENLTHKLVEEFIVVAIVCGLFL 357

Query: 363  GNIRAALITAMVIPLSMLFTFTGMFNNKVSANLMSLG--ALDFGIIVDGAVVIVENAIRR 420
             ++R+AL+  + +PL +L  F  M    V+AN+MSLG  A+  G +VD AVV++ENA ++
Sbjct: 358  WHVRSALVAILTLPLGVLAAFVVMRFQGVNANIMSLGGIAIAIGAMVDAAVVMIENAHKK 417

Query: 421  LAHAQHKH-GRMLTKTERFHEVFAAAREARRPLIFGQLIIMVVYLPIFALTGVEGKMFHP 479
            +   +  H    L    R+  +  AA E    L F  LII + ++P+F L G EG++F P
Sbjct: 418  IERWEEDHPDEHLEGDTRWTVITEAAAEVGPALFFSLLIITLSFIPVFTLEGQEGRLFAP 477

Query: 480  MAFTVVMALLGAMVLSVTFVPAAIAMFVTGKVK-EEEGVVMRTARLRYEPVLQWVLGH-R 537
            +AFT   A+  A +LSVT VP  + + + GK+  E+   V R     Y P L W +   R
Sbjct: 478  LAFTKTYAMASAAILSVTLVPVLMGLLIRGKIPPEQSNPVNRWLTNIYRPALDWTMRRPR 537

Query: 538  NIAFSAAVALVVLSGLLASRMGSEFIPSLSEGDFAMQAMRVPGTSLTQSVEMQQRLEKAV 597
             +   AA+A    +  L +++G EF+P + EGD       +PG S  ++ ++ Q+ ++ +
Sbjct: 538  TVLLIAALAFATTAWPL-TQLGGEFMPKMEEGDLLYMPSALPGLSAAKASDLLQQTDR-L 595

Query: 598  IAQVPEVERMFARSGTAEIASDPMPPNASDAYIMLKPQDQWPNPKKPRDELIAEVQKAAA 657
            I  VPEVE +F ++G AE A+DP P    +  I  KP+DQW  P    D+L+ E+ +   
Sbjct: 596  IKTVPEVESVFGKAGRAETATDPAPLEMFETTIQFKPRDQW-RPGMTPDKLVEELDRTVK 654

Query: 658  GVPGSNYELSQPIQLRFNELISGVRSDVAVKVFGDDMDVLNNTANKIAAALKAVPGSSEV 717
             +PG       PI+ R + L +G++S + VKV G D+  L+  A+ +    K VPG S  
Sbjct: 655  -LPGLANVWVPPIRNRIDMLATGIKSPIGVKVSGADLAELDRIAHDVETVAKTVPGVSSA 713

Query: 718  KVEQTSGLPVLTINIDREKAARYGLNIADVQNSIAIAVGGRQAGTLYEGDRRFDMVVRLP 777
              E+ +G   + +++DR  AAR+GLNI DVQ  ++ A+GG   G   EG  R+ + VR P
Sbjct: 714  LAERLTGGRYVDVDVDRAAAARFGLNITDVQRIVSGAIGGETIGETVEGLARYPISVRYP 773

Query: 778  ETVRTDVAGMSSLLIPVPANAAQGANQIGFIPLSQVANLDLQLGPNQISRENGKRLVIVS 837
              +R  + G+  L +  P+           I L  +A + +  GP  +  EN +    V 
Sbjct: 774  RELRDSLDGIRMLPVLTPSGQQ--------ITLGTIARVSIAEGPPMLKTENARPSTWVY 825

Query: 838  ANVRGRDLGSFVEEATASLDKKVQIPAGYWTTWGGQFEQLQSAAKRLQIVVPVALLLVMT 897
             +VRGRDL S V +   ++ ++V +  G    + GQFE LQ A  +L++VVP  LL++  
Sbjct: 826  VDVRGRDLASVVSDLQHAIARQVTLSPGVSVAYSGQFEYLQRAVAKLKLVVPATLLIIFV 885

Query: 898  LLFLMFNNLKDGMLVFTGIPFALTGGVVALWLRDIPLSISAGVGFIALSGVAVLNGLVMI 957
            LL+++F    +  L+   +PFALTGG+  L+L     S++ GVGFIAL+GV+   G+VM+
Sbjct: 886  LLYMIFGRFDEAALIMGTLPFALTGGIWILYLLGFNQSVATGVGFIALAGVSAEFGVVML 945

Query: 958  AFIRGLREEGRT------LRQAVDEGALTRLRPVLMTALVASLGFIPMALATGTGAEVQR 1011
             +++   EE RT      +  AV EGAL R+RP  MT  V     +P+ L +G G+EV  
Sbjct: 946  IYLKNALEE-RTDPDVAEVETAVREGALLRVRPKAMTVAVILAALLPILLGSGAGSEVMS 1004

Query: 1012 PLATVVIGGILSSTALTLLVLPALY 1036
             +A  +IGG+L++  L++ VLPA Y
Sbjct: 1005 RIAAPMIGGMLTAPLLSMFVLPAAY 1029



 Score = 47.0 bits (110), Expect = 7e-09
 Identities = 83/389 (21%), Positives = 159/389 (40%), Gaps = 54/389 (13%)

Query: 151  VKEDGTPYTPTDLRVIQDWIIKPQLRNVPGV----AEINTIGGYAKQFLVAPDPKRLATY 206
            VK  G      D R+  D  ++   + VPGV    AE  T G Y     V  D    A +
Sbjct: 683  VKVSGADLAELD-RIAHD--VETVAKTVPGVSSALAERLTGGRYVD---VDVDRAAAARF 736

Query: 207  KLTLNDLVAALESNNANVGAGYIERNGEQLL-----IRAPGQV-GNIEDIANIVITSVDG 260
             L + D+   +   +  +G   I    E L      +R P ++  +++ I  + + +  G
Sbjct: 737  GLNITDVQRIV---SGAIGGETIGETVEGLARYPISVRYPRELRDSLDGIRMLPVLTPSG 793

Query: 261  APIRISSVADVSIGKELRTGAATENGREVVLGTVFMLIGENSRTVSQAVAAKLADINR-- 318
              I + ++A VSI  E      TEN R     + ++ +    R ++  V+     I R  
Sbjct: 794  QQITLGTIARVSIA-EGPPMLKTENARP----STWVYVDVRGRDLASVVSDLQHAIARQV 848

Query: 319  TLPKGVVAVTVYDRTNLVEKAIATVKKNLVEGAILVIAILFLFLGNIRAALITAMVIPLS 378
            TL  GV +V    +   +++A+A +K  +    +++  +L++  G    A +    +P +
Sbjct: 849  TLSPGV-SVAYSGQFEYLQRAVAKLKLVVPATLLIIFVLLYMIFGRFDEAALIMGTLPFA 907

Query: 379  ML----FTFTGMFNNKVSANLMSLG----ALDFGIIVDGAVVIVENAIRRLAHAQHKHGR 430
            +       +   FN  V+  +  +     + +FG+++   ++ ++NA+            
Sbjct: 908  LTGGIWILYLLGFNQSVATGVGFIALAGVSAEFGVVM---LIYLKNALEERTDPD----- 959

Query: 431  MLTKTERFHEVFAAAREAR----RPLIFGQLIIMVVYLPIFALTGVEGKMFHPMAFTVVM 486
                     EV  A RE      RP      +I+   LPI   +G   ++   +A  ++ 
Sbjct: 960  -------VAEVETAVREGALLRVRPKAMTVAVILAALLPILLGSGAGSEVMSRIAAPMIG 1012

Query: 487  ALLGAMVLSVTFVPAAIAMFVTGKVKEEE 515
             +L A +LS+  +PAA  +    K+K  +
Sbjct: 1013 GMLTAPLLSMFVLPAAYLLLRRPKMKPND 1041