Pairwise Alignments

Query, 652 a.a., putative transposase from Pseudomonas putida KT2440

Subject, 648 a.a., transposase from Magnetospirillum magneticum AMB-1

 Score =  144 bits (363), Expect = 1e-38
 Identities = 148/513 (28%), Positives = 221/513 (43%), Gaps = 32/513 (6%)

Query: 133 STIRRWAAKYIGQN-VVKLIPQHAKKGRAAAIQGELEVILEGVINKTYLQDTIPAVSVVV 191
           +T+ RW  +Y G+  +  L P    +     +  E+E I+  VI++ YL         V+
Sbjct: 108 ATLYRWIKRYEGRRRMTDLAPSRRGRKMPKRLSPEVEAIIASVIDEKYLSTQKANGEEVI 167

Query: 192 SEFEDQIKERNKSRLPSDQLKIPSGMTVRRYIAKLDPYLVDKERLGKHAA-DKKHRVAAG 250
            E   + +  N S+        P   TVR  +  +DP      R GK AA DK   V   
Sbjct: 168 LEVHRRCRAANLSK--------PCAETVRARLRAIDPKEKVLRREGKKAAHDKFGAVKGN 219

Query: 251 VLRVHEILERWEIDHTLLDVQLVDETSGLCIGRPYLTIVLDRFSRMVMGYLLHLSAPNTE 310
                  L   +IDHTLLD+ ++DE   L IGRP+LT+ +D FSRMV+GY L L  P   
Sbjct: 220 FPGADAPLAVVQIDHTLLDIMVLDEEMRLPIGRPWLTLAIDVFSRMVVGYHLSLDNPGAF 279

Query: 311 TVLRVIERSIRPKAELLKRFPKVRNEWWARGLPARIVPDNAAEFHAGDLIMGFNELGIEI 370
            V   +   +  KA  L+R   ++ EW   G P  I  DN  +F +  +    +E  I  
Sbjct: 280 AVGLCLCHGMLDKAAELERL-GIKGEWPVWGKPRMIHSDNGKDFRSYLIQDTLDEHDIRY 338

Query: 371 MYPASRAPQRKGAVERFFSTQNLGLIHNLPGTTFSNIQQRGDYDSEKNACFTLPQLEAVV 430
            +   + P   G +ER   T     +H LPG TFS  +QRG+Y SE  A  TL  L   +
Sbjct: 339 EFRPPKTPHYGGHIERLAGTL-ARKVHALPGATFSTPKQRGEYKSEAKAQMTLRDLRPWL 397

Query: 431 VKWIVDGYHQTPHRGLDNRTPAQVWGT----SEANHVISLPVDLDS---LECILAKRASV 483
           +  IV  YH   H G+    P   W      ++    I LP  + +   L          
Sbjct: 398 LNLIVGVYHNKVHSGI-GCPPLARWNDGIMGTDRFRGIGLPEPIPNPRRLRLDFLPFIER 456

Query: 484 KVHHYGIEVAKVGYHSTELAELRMRLADG---EKVNVRYRD--EAGHVWVHDRFRNLFFK 538
            V   GI   K+ Y    L++  +R  +G    K  VR RD  +   ++  D   N + +
Sbjct: 457 TVQPEGIVWGKIWYRDPLLSQW-VRADEGRRRRKFKVR-RDPTDISKLYFLDPRLNDYVE 514

Query: 539 VPAKDERMAGKSREVWKAAEKALREKYNEQPSFEATHRCYQEIMEDADEARRSQTLRKRR 598
           +P +D      S   ++A E  L+ +     + +A    Y+++     EA R QT R RR
Sbjct: 515 IPYRDIGRPSISLWDYRAVEAWLKRQGKAAENEQAIFDAYEDMHRITAEAAR-QTKRVRR 573

Query: 599 AAA----IAKIDKEGRVTESTPPPKVLAEVEWT 627
             A    + K   E  +    PPP+  A+ + T
Sbjct: 574 EQAKNRELGKHRAELTLDPPRPPPESPAKPKAT 606