Pairwise Alignments

Query, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

Subject, 810 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Rhodanobacter sp000427505 FW510-R12

 Score =  972 bits (2513), Expect = 0.0
 Identities = 501/806 (62%), Positives = 614/806 (76%), Gaps = 3/806 (0%)

Query: 2   SENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDI 61
           S    YDSS+IKVLKGL+AVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+CD +
Sbjct: 5   SNESHYDSSNIKVLKGLEAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCDKV 64

Query: 62  TVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG 121
            V I  D S+SV DNGRGIPVD+H EE  S AEV+MTVLHAGGKFD NSYKVSGGLHGVG
Sbjct: 65  AVTILDDGSVSVSDNGRGIPVDMHPEEHRSTAEVVMTVLHAGGKFDANSYKVSGGLHGVG 124

Query: 122 VSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETF-KN 180
           VSVVNALS+ L LT+ R G  ++Q Y  G P  P+  VG S   GT + F PS  TF  N
Sbjct: 125 VSVVNALSDHLWLTIYRDGHEYQQEYALGEPLYPLKEVGPSNKRGTTVRFLPSPATFTSN 184

Query: 181 IHFSWDILAKRIRELSFLNSGVGILLKDERS-GKEEFFKYEGGLRAFVEYLNTNKTPVNS 239
           I F ++ILAKR+REL+FLNSGV I LKDER  G+ + F YEGG+R+FV++L   KT ++ 
Sbjct: 185 IDFHYEILAKRLRELAFLNSGVTIELKDERGEGRADTFAYEGGIRSFVQHLAQMKTALHP 244

Query: 240 QVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYI 299
            V   + ++D G+ VEVA+QW DS+NE + CFTNNIPQRDGGTHL GFR++LTRSL +YI
Sbjct: 245 NVISLSAEQD-GIVVEVAMQWTDSYNEIMFCFTNNIPQRDGGTHLTGFRAALTRSLQNYI 303

Query: 300 EQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYF 359
           E+EGLAK  KVA +GDD REG+ A++SVKVPDPKFSSQTKDKLVSSEVKT VEQ +N+  
Sbjct: 304 EKEGLAKNAKVALSGDDMREGMIAVLSVKVPDPKFSSQTKDKLVSSEVKTVVEQVINEKL 363

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
            +FLLE+PNEAKA+  K++DAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL
Sbjct: 364 GEFLLEHPNEAKAIASKVVDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 423

Query: 420 SELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCG 479
            EL+LVEGDSAGGSAKQGRNRRTQA+LPLKGKILNVEKARFD+M++S EVGTLITALG G
Sbjct: 424 CELFLVEGDSAGGSAKQGRNRRTQAVLPLKGKILNVEKARFDRMLASAEVGTLITALGTG 483

Query: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKV 539
           IG++EYN DKLRYH II+MTDADVDGSHIRTLLLTFF+RQ+PEL+ERG+IYI  PPLYKV
Sbjct: 484 IGKDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIGLPPLYKV 543

Query: 540 KRGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRL 599
           K+GKQE YIKDD A+ +++  SA+++A+L     AP ++G  LE L+  ++  +  + RL
Sbjct: 544 KQGKQELYIKDDAALNDFLISSAVDNAALTYAPDAPPITGEALEKLLRGYQLALDQIARL 603

Query: 600 SRLYPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQKSGLAYNASLREDKER 659
           +  +   +    +    +T     D   MQAWL     RL +S      Y  +LR     
Sbjct: 604 AHRFDAAVLNVLLEHQPITPALWSDPVAMQAWLDGAAQRLAASGLGKPHYRLTLRPAAGG 663

Query: 660 NVWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIV 719
                EV    HGL+      + FF S + R ++ I  +++ ++   A V+RG   + ++
Sbjct: 664 QPAAIEVVKEQHGLSHTWLLPQPFFASAELRPILAISQQIAGMIQPDAVVRRGNASRGVL 723

Query: 720 EFKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIF 779
            F +  +WL++E  K  +IQR+KGLGEMNP+QLW+TT++P  RRML+V IEDAIAADQ+F
Sbjct: 724 SFLDARNWLLDEAKKGRSIQRFKGLGEMNPEQLWDTTVNPDTRRMLQVGIEDAIAADQMF 783

Query: 780 NTLMGDAVEPRRDFIESNALSVSNLD 805
           + LMG+AVEPRRDFIE+NAL V+NLD
Sbjct: 784 SMLMGEAVEPRRDFIEANALKVANLD 809