Pairwise Alignments

Query, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

Subject, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  581 bits (1498), Expect = e-170
 Identities = 303/561 (54%), Positives = 398/561 (70%), Gaps = 15/561 (2%)

Query: 7   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDITVIIH 66
           Y + +I++L+GL+AVRKRP MYIGD     GLHH+++EVVDNSIDEALAGHCD I V + 
Sbjct: 12  YSAGNIQILEGLEAVRKRPAMYIGDVGV-KGLHHLIWEVVDNSIDEALAGHCDTIHVTVL 70

Query: 67  PDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 126
            D S+ V DNGRGIP D+H++E  SA EV+MTVLHAGGKFD ++YKVSGGLHGVGVS VN
Sbjct: 71  EDNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVSCVN 130

Query: 127 ALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKNIHFSWD 186
           ALS  L  TV R+GK++EQ Y  GVPQ  +  +G++E  GT IHF P  + F    + ++
Sbjct: 131 ALSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGETEKRGTIIHFVPDGDIFTVTEYKYE 190

Query: 187 ILAKRIRELSFLNSGVGILLKDERSGKEE-------FFKYEGGLRAFVEYLNTNKTPVNS 239
            +A R+RE++FLN+GV I  KD R   EE       FF  EGGL  FVEYL+  +  +  
Sbjct: 191 TIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFS-EGGLIEFVEYLDETREKIIQ 249

Query: 240 QVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYI 299
           +  +   +++  V V+VA+ +N SF+EN++ + N I   +GGTH+ GFR +LTR+L  Y 
Sbjct: 250 EPIYIESEKN-AVPVQVAMSYNSSFSENVVSYVNTINTYEGGTHVSGFRRALTRTLKGYA 308

Query: 300 EQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYF 359
           ++ G+  K K   +GDD REGLTA+ISVKV +P+F  QTK KL +SEV +AV+  +++  
Sbjct: 309 DKSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVL 368

Query: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419
             +L E+P EAK +VGK++ AA+AR AARKAREM +RK  L   GLPGKLADC   +P +
Sbjct: 369 QYWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEV 428

Query: 420 SELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCG 479
            ELYLVEGDSAGGSAKQGR+R  QAILPLKGKILNVEKA   K+  + E+  ++TALG  
Sbjct: 429 CELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVK 488

Query: 480 IG----REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPP 535
            G     +E ++  LRYH I+IMTDAD+DGSHIRTL+LT FFR +  L+E GY+YIA PP
Sbjct: 489 FGTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPP 548

Query: 536 LYKVKRGKQEQYI-KDDEAME 555
           LY +K+GK E+Y   +DE ++
Sbjct: 549 LYLLKKGKDERYCWSEDERIK 569



 Score = 89.7 bits (221), Expect = 5e-22
 Identities = 42/61 (68%), Positives = 48/61 (78%)

Query: 738 IQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIESN 797
           IQRYKGLGEMNP+QLW TTMDP  R + +VTIE A  AD +F+ LMGD V PRR+FIE N
Sbjct: 585 IQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIEKN 644

Query: 798 A 798
           A
Sbjct: 645 A 645