Pairwise Alignments

Query, 367 a.a., DNA replication and repair protein from Pseudomonas putida KT2440

Subject, 357 a.a., DNA recombination and repair protein RecF from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  275 bits (704), Expect = 1e-78
 Identities = 149/360 (41%), Positives = 217/360 (60%), Gaps = 4/360 (1%)

Query: 1   MSLRRIMVTAVRNLHPVTLLPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPV 60
           MSL R+++   RN+    L  SP  N L GANGSGKTSVLEA++ LG  R+FRS +   V
Sbjct: 1   MSLTRLLIKDFRNIENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQPGRV 60

Query: 61  IQYEQAACTVFGEVQLTEGGTSNLGVSRERQGEFTIRIDGQNARSAAQLAELLPLQLINP 120
           I++EQ A  + G +Q  E  TS +G+++++QG+  +RIDG +    A+LA L+P+QLI P
Sbjct: 61  IRHEQEAFVLHGRLQSEERETS-IGLTKDKQGDSKVRIDGTDGHKIAELAHLMPMQLITP 119

Query: 121 DSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDPASQAAWD 180
           + F LL G PK RR FLDWG FH E  F  AW  L++ L+QRN+ LR  +     +  WD
Sbjct: 120 EGFTLLNGGPKYRRAFLDWGCFHNEAGFFTAWSNLKRLLKQRNAALRQVSRYEQLRP-WD 178

Query: 181 RELCLASAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELQEVLASSL 240
           +EL   + +I  +R  Y  A+      T  + +    LT S+ RGW+K+ +  +VL  S 
Sbjct: 179 KELIPLAEQISTWRAEYSSAIAQDMADTCQQFLPEFSLTFSFQRGWEKETDYADVLERSF 238

Query: 241 LRDQQMGHTQAGPQRADLRLRLAGNNAADILSRGQQKLVVCALRIAQGHLVSQARRGHCI 300
            RD+ + +T  GP +AD R+R  G    D LSRGQ KL++CALR+AQG  +++     C+
Sbjct: 239 ERDRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCL 298

Query: 301 YLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT 360
           YL+DD  SELDD  R  L   L+  + QVF++ +  E + +   ++    +F VE+G+IT
Sbjct: 299 YLIDDFASELDDARRGLLASRLKATQSQVFVSAISAEHVID--MSDENSKMFTVEKGKIT 356