Pairwise Alignments

Query, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

Subject, 459 a.a., Chromosomal replication initiator protein DnaA from Variovorax sp. SCN45

 Score =  442 bits (1138), Expect = e-129
 Identities = 235/502 (46%), Positives = 317/502 (63%), Gaps = 56/502 (11%)

Query: 5   LWQQCVELLRDELPAQQFNTWIRPLQVEAEGD--ELRVYAPNRFVLDWVNEKYLGRLLEL 62
           LWQ CV+ L  EL  QQFNTWI+PL  +   D   + V+  NRF LDW+  +Y G++  +
Sbjct: 10  LWQACVDQLAQELSEQQFNTWIKPLTAQVADDLSRMTVFVANRFKLDWIRAQYAGKIAAM 69

Query: 63  LGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAASLAQTQAHKTAPAAAVEPVAVA 122
             E   G   A+ L +  R +         PV +A  A + +T   +       EP A  
Sbjct: 70  -AEKMYGQPVAIELALAPRET---------PVRSAPVAVMTETDVPRDVAGPGEEPAAAG 119

Query: 123 AAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFDTFVE 182
                                                         + LN   TFDT VE
Sbjct: 120 --------------------------------------------FKNRLNSGLTFDTLVE 135

Query: 183 GKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHS 242
           G +N++ARAAA  VA  P H YNPLF+YGGVGLGKTHLMHAVGN LL    ++KV+Y+H+
Sbjct: 136 GTANRMARAAAMHVAGMPGHLYNPLFIYGGVGLGKTHLMHAVGNRLLADRADSKVLYIHA 195

Query: 243 ERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQ 302
           E+FV+D+VKA Q    +EFK  Y S+D LLIDD+QFFA K+R+QEEFF+ F ALL     
Sbjct: 196 EQFVSDVVKAYQRKTFDEFKERYHSLDLLLIDDVQFFANKDRTQEEFFNAFEALLAKKSH 255

Query: 303 VILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAF 362
           +++TSD YPK +  + ERL SRF  GLTVA+EPPELE RVAIL+ KA     E+P + AF
Sbjct: 256 IVMTSDTYPKGLADIHERLVSRFDSGLTVAIEPPELEMRVAILINKARAESAEMPEEVAF 315

Query: 363 FIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTV 422
           F+A+ +RSNVRELEGAL++++A+S F  ++I+I L RE+L+DLL++Q++ +SV+NIQ+TV
Sbjct: 316 FVAKNVRSNVRELEGALRKILAYSRFNQKEISIALAREALRDLLSIQNRQISVENIQKTV 375

Query: 423 AEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHACRK 482
           A+YYKIK++D+ SK+R  S+ARPRQ+AM L+KELT  SLPEIG++FGGRDHTTVLHA RK
Sbjct: 376 ADYYKIKVADMYSKKRPASIARPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRK 435

Query: 483 INELKESDADIREDYKNLLRTL 504
           I+  ++   ++ +    L +TL
Sbjct: 436 ISGERQQLTELNQQLHVLEQTL 457