Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 314 a.a., motility protein MotB from Ralstonia solanacearum PSI07

 Score =  233 bits (594), Expect = 5e-66
 Identities = 130/309 (42%), Positives = 180/309 (58%), Gaps = 16/309 (5%)

Query: 7   IIVKRIKRFGDGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFKDPI-- 64
           I+++R K+ G GHHGGAWKIA+ADF TAMMAFFL++WLLS+ T  +  ++  YF+ P+  
Sbjct: 10  IVIRRNKKGGHGHHGGAWKIAYADFVTAMMAFFLLMWLLSSVTKAELSSVETYFRTPLKV 69

Query: 65  ---GFSESGTPYIIDLGGSPQLAPEKTINPEVKSEPTPDTSLQLDQDKVESMAEQVERER 121
              G + SG    I L GSP +   K   P+    P+P    Q       ++ ++ +   
Sbjct: 70  ALFGGAGSGDQSSI-LNGSPAI---KQNMPQPNPSPSPTVQRQ------RNVRDESDDAA 119

Query: 122 LELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFED 181
           L  L Q +   +E NP + +FK Q+L ++T +GLRIQI+D +NRPMF   SA +QPY   
Sbjct: 120 LNKLKQHIMEMIESNPVMNQFKHQLLIDMTSEGLRIQIVDQQNRPMFANASAEVQPYMRT 179

Query: 182 ILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDTQV 241
           IL  +   +  VPN IS+SGHTDA  YA    + NWELSA+RANA+RR L+AGG    +V
Sbjct: 180 ILRELGAALNDVPNPISLSGHTDATQYATQNGYSNWELSADRANASRRELIAGGMKPEKV 239

Query: 242 ARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKKAQRTIEGEQTQPAAPDAAQPGAAAPVP 301
           ARVVG  +S   D+ +  NP+NRRI I+VL  +    +     +P A D    G      
Sbjct: 240 ARVVGLEASVPLDKTDAFNPINRRISIVVLNNRTANAVRAGGIEPTA-DLHNDGKDTLTD 298

Query: 302 AAPQAQAPA 310
           AA +A   A
Sbjct: 299 AAARATGVA 307