Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 346 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

 Score =  583 bits (1502), Expect = e-171
 Identities = 295/345 (85%), Positives = 313/345 (90%), Gaps = 5/345 (1%)

Query: 1   MENNQPIIVKRIKRFGDGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60
           MENNQPIIVKR+KRFG GHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF
Sbjct: 1   MENNQPIIVKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60

Query: 61  KDPIGFSESGTPYIIDLGGSPQLAPEKTINPEVKSEPTPDTSLQLDQDKVESMAEQVERE 120
           +DPIGFSESGTPY+IDLGGSP++AP+KTINPEVK+EPT  +  QL +D+VE+MAEQVERE
Sbjct: 61  QDPIGFSESGTPYVIDLGGSPEMAPDKTINPEVKTEPTQQSPTQLSKDQVETMAEQVERE 120

Query: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFE 180
           RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFD+GSARLQPYFE
Sbjct: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFE 180

Query: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDTQ 240
           DILLAMADTIKAVPNK+SISGHTDAKPYAGTG++GNWELSANRANAARRALVAGGYPD Q
Sbjct: 181 DILLAMADTIKAVPNKVSISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQ 240

Query: 241 VARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKKAQRTIEGEQTQPAAPDAAQPGAAAPV 300
           VARVVGYASSSLFDR++P NPVNRRIDIIVLTKKAQR IEGEQ  P  P AA    AAP 
Sbjct: 241 VARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKKAQRNIEGEQGAPETPPAAPTAPAAPA 300

Query: 301 P-AAPQAQAP----AAEPEPMQPRELRQKLNIFEDGVLKMDENKQ 340
             AAP A AP    A E  PMQPRELRQKLNIFEDG LKMDE K+
Sbjct: 301 SGAAPGASAPADPGATEQAPMQPRELRQKLNIFEDGTLKMDEAKE 345