Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 339 a.a., Motility protein B from Pseudomonas lactucae CFBP13502

 Score =  520 bits (1338), Expect = e-152
 Identities = 264/336 (78%), Positives = 289/336 (86%), Gaps = 8/336 (2%)

Query: 1   MENNQPIIVKRIKRFGDGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60
           MENNQPII+KR+KRF  GHHGGAWKIAFADFATAMMAFFLVLWL+STATPEQKIAIAGYF
Sbjct: 1   MENNQPIIIKRVKRFAAGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYF 60

Query: 61  KDPIGFSESGTPYIIDLGGSPQLAPEKTINPEVKSEPTPDTSLQLDQDKVESMAEQVERE 120
           KDPIGFSESGTP++IDLGGSP+LAPE+TINPEVK+E  P   + +++D VE+MAEQVE+E
Sbjct: 61  KDPIGFSESGTPFVIDLGGSPELAPERTINPEVKTE-APQEKIPIERDTVETMAEQVEQE 119

Query: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFE 180
           RLELLLQELQNKVEENPQ+ KFKDQI FEIT +GLRIQI DA NRPMFD GSARL+PYFE
Sbjct: 120 RLELLLQELQNKVEENPQMMKFKDQISFEITPEGLRIQITDAANRPMFDSGSARLKPYFE 179

Query: 181 DILLAMADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDTQ 240
           DILLAMADTIK VPNKISISGHTDAKPYAG GDFGNWELSANRANAARRALVAG YPD Q
Sbjct: 180 DILLAMADTIKTVPNKISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQ 239

Query: 241 VARVVGYASSSLFDRQNPLNPVNRRIDIIVLTKKAQRTIEGEQTQPAAPDAAQPGAAAP- 299
           VARVVG+ASS LFD ++P NP NRRIDI+VLTKKAQR IEG+Q  P  P    PGA AP 
Sbjct: 240 VARVVGFASSQLFDHKDPFNPANRRIDIVVLTKKAQRAIEGDQPPPPQP---TPGAGAPG 296

Query: 300 -VPAAPQAQAPAAEPEPMQPRELRQKLNIFEDGVLK 334
            VPA P A  P  EP P    ELRQKLN+F+DG +K
Sbjct: 297 EVPADPNAIPPGQEPLP--AHELRQKLNLFDDGGVK 330