Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 351 a.a., flagellar motor protein MotB from Pectobacterium carotovorum WPP14

 Score =  221 bits (562), Expect = 3e-62
 Identities = 131/344 (38%), Positives = 191/344 (55%), Gaps = 35/344 (10%)

Query: 1   MENNQPIIVKRIKRFGDGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYF 60
           M++  PII K+ K    GHHGG+WKIA+ADF TAMMA FLV+WL++ +TP Q   IA YF
Sbjct: 1   MKHQHPIIRKKRKSGHGGHHGGSWKIAYADFMTAMMALFLVMWLIAISTPMQLAQIAEYF 60

Query: 61  KDPIGFSESGTPYIIDLGGSPQLAPEKTINPEVKSEPTPDTSLQLDQDKVESMAEQVERE 120
           +         TP  + L    + +   +  P   ++PT          K +++ ++++  
Sbjct: 61  R---------TPLKVALTSGSKSSDSSSPIPGGGNDPTQQDGEVKKAIKTDNVEKKLDEV 111

Query: 121 RLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFE 180
           RL  L + L   +E +P+L+  +  +L E+  +GLRIQI+D++NRPMF  GSA+++PY  
Sbjct: 112 RLNRLRERLDQLIEADPRLRALRPHLLIEMIDEGLRIQIIDSQNRPMFKTGSAQVEPYMR 171

Query: 181 DILLAMADTIKAVPNKISISGHTDAKPY-AGTGDFGNWELSANRANAARRALVAGGYPDT 239
           DIL A+A  +   PNK+SISGHTD   Y  G   + NWELSA+RANA+RR L+ GG  D 
Sbjct: 172 DILRAIAPILNDFPNKLSISGHTDDVQYTTGERGYSNWELSADRANASRRELIFGGLSDG 231

Query: 240 QVARVVGYASS-SLFDRQNPLNPVNRRIDIIVLTKKAQRTIEGEQ--------------- 283
           +V RVVG A++ SL       + +NRRI ++VL+++AQ+ IE E                
Sbjct: 232 KVLRVVGMAATMSLKQATGGNDAINRRISLLVLSRQAQKDIEEENAESSAVNIDKVENLQ 291

Query: 284 ---------TQPAAPDAAQPGAAAPVPAAPQAQAPAAEPEPMQP 318
                    T PAA ++     +    A+PQ       PE  QP
Sbjct: 292 NMELDKPKPTTPAAENSDNNNTSGSGGASPQPTNGVPAPERQQP 335