Pairwise Alignments

Query, 340 a.a., flagellar motor protein MotB from Pseudomonas sp. SVBP6

Subject, 211 a.a., putative lateral flagellar export/assembly protein LafU from Escherichia coli ECRC62

 Score =  112 bits (279), Expect = 1e-29
 Identities = 61/154 (39%), Positives = 89/154 (57%), Gaps = 1/154 (0%)

Query: 126 LQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFEDILLA 185
           L EL   +    +    +  +  EI   GLR+ I D +NR MF+ GSA++ P+F+ +L+ 
Sbjct: 29  LGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVE 88

Query: 186 MADTIKAVPNKISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDTQVARVV 245
           +A    ++ NKI I+GHTDA  Y     + NW LS +RA +ARR L   G P+ +V +V 
Sbjct: 89  LAPVFDSLDNKIIITGHTDAMAYK-NNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVS 147

Query: 246 GYASSSLFDRQNPLNPVNRRIDIIVLTKKAQRTI 279
             A   L D +NP +  NRRI+I+VLTK A  T+
Sbjct: 148 AMADQMLLDSKNPQSAGNRRIEIMVLTKSASDTL 181