Pairwise Alignments

Query, 671 a.a., excinuclease ABC subunit UvrB from Pseudomonas sp. SVBP6

Subject, 673 a.a., excinuclease ABC subunit UvrB from Escherichia coli ECRC100

 Score =  932 bits (2408), Expect = 0.0
 Identities = 470/670 (70%), Positives = 566/670 (84%), Gaps = 4/670 (0%)

Query: 4   FQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTLVLA 63
           F+L + F+P+GDQPEAIR + EG+E GLAHQTLLGVTGSGKTF+IANVIA +QRPT+VLA
Sbjct: 5   FKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLA 64

Query: 64  PNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRL 123
           PNKTLAAQLYGE K FFP NAVEYFVSYYDYYQPEAYVPSSDTFIEKDAS+N+HIEQMRL
Sbjct: 65  PNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124

Query: 124 SATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTRN 183
           SATKA+LERRD ++V +VS IYGLG P+ YLKM+LH+  G  +DQRA+LRRLA+LQY RN
Sbjct: 125 SATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARN 184

Query: 184 EMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRFTFY 243
           +  F R TFRVRG+VIDIFPAESD  A+R+ELFD+EVE ++ FDPLTG+++  +PRFT Y
Sbjct: 185 DQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIY 244

Query: 244 PKSHYVTPRETLLEAVDGIKVELAQRLEYLHKANKLVEAQRLEQRTRFDLEMILELGYCN 303
           PK+HYVTPRE +++A++ IK ELA R + L + NKL+E QRL QRT+FDLEM+ ELGYC+
Sbjct: 245 PKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCS 304

Query: 304 GIENYSRYLSGRPAGAPPPTLYDYLPDDALLVIDESHVSVPQVGAMYKGDRSRKETLVEY 363
           GIENYSR+LSGR  G PPPTL+DYLP D LLV+DESHV++PQ+G MY+GDR+RKETLVEY
Sbjct: 305 GIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEY 364

Query: 364 GFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGNYEAEHA-GRVVEQVVRPTGLVDPQVE 422
           GFRLPSALDNRP++F+E+EA++PQTI+VSATPGNYE E + G VV+QVVRPTGL+DP +E
Sbjct: 365 GFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIE 424

Query: 423 VRPATTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTDYLADHDVRVRYLHSDIDTVE 482
           VRP  TQVDDLLSEIR+R A+ ERVLVTTLTKRMAEDLT+YL +H  RVRYLHSDIDTVE
Sbjct: 425 VRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVE 484

Query: 483 RVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 542
           R+EIIRDLRLG FDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR
Sbjct: 485 RMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544

Query: 543 NLNGRAILYADNMTGSMQRAIGETERRRDKQIAFNAANGIVPKGVVKDITDIME-GANVP 601
           N+NG+AILY D +T SM +AIGETERRR+KQ  +N  +GI P+G+ K + DI+  G N+ 
Sbjct: 545 NVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIA 604

Query: 602 GSRSKKRKGMAKAAEESARYEAELRSPGEIAKRIKQLEEKMYQLARDLEFEAAAQLRDEI 661
            +++K R G ++   E      ++ SP  + ++I +LE  M Q A++LEFE AAQ+RD++
Sbjct: 605 KTKAKGR-GKSRPIVEPDNVPMDM-SPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQL 662

Query: 662 TALRERMITA 671
             LRE  I A
Sbjct: 663 HQLRELFIAA 672