Pairwise Alignments

Query, 399 a.a., hypothetical protein from Pseudomonas sp. S08-1

Subject, 393 a.a., Bcr/CflA family multidrug resistance transporter from Pseudomonas putida KT2440

 Score =  159 bits (401), Expect = 2e-43
 Identities = 124/395 (31%), Positives = 186/395 (47%), Gaps = 15/395 (3%)

Query: 7   LLAMLMVLTALGEISTQLLIPALSRIEQGLGAMHGASVAALSGFVAAFGIGQLLLGPLSD 66
           ++ +L  L+A G ++    +PA   + Q          A L+ +     IGQL  GP++D
Sbjct: 5   MVLILGALSAFGPLAIDFYLPAFPAMAQAFATDEKHVQATLAAYFLGLSIGQLAYGPVAD 64

Query: 67  RVGRRPVLIGGLALYLAATGWMLLADSMTGFILGRVAQGLGACAALVLARAIVRDVWKAQ 126
           R GRR  L+ G+ L+  A+     A ++   ++ R  Q LG CA +VL+RAIV D     
Sbjct: 65  RFGRRKPLMFGVTLFTLASLACAYAPNLDTLVVARFIQALGGCAGMVLSRAIVSDKCDPV 124

Query: 127 A-APALALTVIGMLSAIALAPMVGGLLTQWGGWHAPVLASMTIGSIALLSVLTFYRES-- 183
           A A   +  ++ M  A  LAPM+GG+L    GW +  LA     +  LL+V     ES  
Sbjct: 125 ASAKVFSQLMLVMGLAPILAPMLGGVLVNLAGWQSIFLALSLFSAGCLLAVSLGLPESLP 184

Query: 184 -NLSLDPTAGHPATLARDYLDLLKQRSSRALALTLAGTYGAMFAVIAGSSAVYIDLLGLS 242
            ++   P +G      R YL LL  R     ALT       MFA IAGS  V+I L G+ 
Sbjct: 185 EHIPRQPLSG----ALRQYLRLLADRVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVP 240

Query: 243 SAQYGMVFGVTISGLIAGALFTQRKIMQLGPQRIVGIGISLVAAGAVLSILLHSALGLSV 302
           +  YG +FG   +G I  A    R + + GP  ++G  + L     ++ + + +     +
Sbjct: 241 AEHYGWLFGTNAAGFILVAQVNARLLAKRGPAFLLGRAVWLYLVAGLVLLGVAALRPAQL 300

Query: 303 LGVSLPQVLVTLGGGMLIPASVAGVVIPNAHRAGLAAGLMGFSQMLGATCSGLLLGALQD 362
             + +P  +     G +IP + A  +     RAG A+ LMG  Q   A  +  L+G L D
Sbjct: 301 WPLLVPLFICIASLGCIIPNASACAMSGQGARAGSASALMGCVQFSVAAGAAALVGLLHD 360

Query: 363 GTAWPM---IGLQGAFAVSAFSLFKLMTRQTRTAA 394
           G+A PM   I L GA  VS      L+TR+ +  A
Sbjct: 361 GSAVPMAIVISLCGALVVSV----ALLTRRLQAKA 391