Pairwise Alignments

Query, 630 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas sp. S08-1

Subject, 748 a.a., PAS-family GGDEF/EAL family protein from Caulobacter crescentus NA1000 Δfur

 Score =  389 bits (999), Expect = e-112
 Identities = 210/439 (47%), Positives = 284/439 (64%), Gaps = 8/439 (1%)

Query: 184 LLRLQQEILRVKDSEASFTHLAQHDALTNLPNRLLIRDRMEQAIGRARRDDEQVALLFLD 243
           LL + ++I   K +EA    LA +D LT+LPNR+L +  + +A+ R  R  + +A+ F+D
Sbjct: 258 LLGVSEDIAERKRAEAQIARLAHYDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVD 317

Query: 244 LDNFKTINDSLGHAAGDELLQEVARRLKDTVRDIDTVSRQGGDEFLMVLADVADLAAVSS 303
           LD FKT+ND+LGH  GD LL+  A RL+  VR+ DTV+R GGDEF +V   + D    + 
Sbjct: 318 LDRFKTVNDTLGHPLGDALLKIAAERLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATR 377

Query: 304 VAALVQQKLAQPFALKGMQIVTSISIGISLFPGDGDDFDTLLKHADMAMYQAKSAGRNGF 363
           +AA + + +A PF L+G  +V   S+G+SL P DGDD D LLK ADMA+Y+AK+ GR  +
Sbjct: 378 LAARIVEAMAAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRGAY 437

Query: 364 CFFDEQMNADTHERLALELDLRQALSRGEFVLHYQPIIDLHGGRLLAAEALLRWQHPQRG 423
            FF+  M+     R ALELDLR+AL  GEF L YQP+  L   R+   EALLRW+HP+RG
Sbjct: 438 HFFERAMDEQLQARRALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERG 497

Query: 424 TLGPDRFIRVAEESGLIVEIGEWVLNEACRQAMLWQAAGLPRFAVAVNLSAVQFRRGNLE 483
            + P  FI +AEE GLIV++GEWVL  AC +A  W         +AVNLS  QFR   L 
Sbjct: 498 MVSPADFIPLAEEIGLIVQLGEWVLRRACAEAANWP----EHVRLAVNLSPAQFRDRGLV 553

Query: 484 AMVHAALNRFGLAPACLELELTESILLQDS----AQLRRLKELGVKLSIDDFGTGYSSLS 539
             V +AL   GL    LELE+TES+LLQDS      L  LK LGV++S+DDFGTGYSSLS
Sbjct: 554 RTVVSALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLS 613

Query: 540 YLQRFQVDKLKIDQSFVRGLTGNAQDQAIVTAIVQMARSLGLHTTAEGIEDEATRALLAE 599
           YL+ F  DK+KIDQ+FVR +  ++   AI+ A++ +  S+G+ TTAEG+E +A    L +
Sbjct: 614 YLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQ 673

Query: 600 LGCDQGQGFLFARPLAATE 618
            GC + QG+  +RP  A+E
Sbjct: 674 QGCAEIQGYFISRPAPASE 692